RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 PDE1BQ01064 536 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 FOXM1Q08050 763 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 ZRSR1Q15695 479 aaKnown RBP4.12□□□□□ -1.75
SMC4-207ENST00000467263 CCNG2Q16589 344 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 KRT24Q2M2I5 525 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 CCDC96Q2M329 555 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 OTUD3Q5T2D3 398 aaPredicted RBP4.12□□□□□ -1.75
SMC4-207ENST00000467263 IRAK1BP1Q5VVH5 260 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 CCDC70Q6NSX1 233 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 CYP20A1Q6UW02 462 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 GFRALQ6UXV0 394 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 DPPA4Q7L190 304 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 TMEM219Q86XT9 240 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 BEST3Q8N1M1 668 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 MAB21L3Q8N8X9 362 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 KBTBD3Q8NAB2 608 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 TMEM116Q8NCL8 245 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 KCNH5Q8NCM2 988 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 MAGEC3Q8TD91 643 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 RHBDF1Q96CC6 855 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 RRNAD1Q96FB5 475 aaKnown RBP4.12□□□□□ -1.75
SMC4-207ENST00000467263 WBP1Q96G27 269 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 TMEM68Q96MH6 324 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 WDFY2Q96P53 400 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 ACOX2Q99424 681 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 STRA6Q9BX79 667 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 POLR1BQ9H9Y6 1135 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 TCF7L2Q9NQB0 619 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 DLGAP2Q9P1A6 1054 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 AMDHD2Q9Y303 409 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 ZNF711Q9Y462 761 aa4.12□□□□□ -1.75
SMC4-207ENST00000467263 FAM237BA0A1B0GVD1 139 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 GOLGA6L9A6NEM1 432 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 SOCS5O75159 536 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 KRT36O76013 467 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 MLYCDO95822 493 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 IGLV2-11P01706 119 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 CDH1P12830 882 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 MYOD1P15172 320 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 KCNA5P22460 613 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 GNL1P36915 607 aaPredicted RBP4.11□□□□□ -1.75
SMC4-207ENST00000467263 CLCN3P51790 818 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 RPS3AP61247 264 aaKnown RBP4.11□□□□□ -1.75
SMC4-207ENST00000467263 ISL1P61371 349 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 MPP1Q00013 466 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 ACSM2AQ08AH3 577 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 ARL16Q0P5N6 197 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 CDONQ4KMG0 1287 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 RNF113BQ8IZP6 322 aaKnown RBP4.11□□□□□ -1.75
SMC4-207ENST00000467263 C1orf87Q8N0U7 546 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 LNX1Q8TBB1 728 aaPredicted RBP4.11□□□□□ -1.75
SMC4-207ENST00000467263 FAM149B1Q96BN6 582 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 CDCA5Q96FF9 252 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 FEM1CQ96JP0 617 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 HARBI1Q96MB7 349 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 NODALQ96S42 347 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 TMEM30AQ9NV96 361 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 RALYQ9UKM9 306 aaKnown RBP4.11□□□□□ -1.75
SMC4-207ENST00000467263 PADI3Q9ULW8 664 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 KCNE2Q9Y6J6 123 aa4.11□□□□□ -1.75
SMC4-207ENST00000467263 A0A1W2PQF6 199 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 A0A1W2PRG0 241 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 BMPR1BO00238 502 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 SPINT2O43291 252 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 LMX1BO60663 402 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 CD4P01730 458 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 CLEC3BP05452 202 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 UMODP07911 640 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 MCM3P25205 808 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 BSGP35613 385 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 CSTF3Q12996 717 aaKnown RBP4.1□□□□□ -1.75
SMC4-207ENST00000467263 MED22Q15528 200 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 FOXL2NBQ6ZUU3 175 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 CACNA2D4Q7Z3S7 1137 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.1□□□□□ -1.751e-6■■■■■ 92.8
SMC4-207ENST00000467263 MUC20Q8N307 709 aaPredicted RBP4.1□□□□□ -1.75
SMC4-207ENST00000467263 SRBD1Q8N5C6 995 aaKnown RBP4.1□□□□□ -1.75
SMC4-207ENST00000467263 PAF1Q8N7H5 531 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 FRMD1Q8N878 549 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 ACVR1CQ8NER5 493 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 TDRD7Q8NHU6 1098 aaKnown RBP4.1□□□□□ -1.75
SMC4-207ENST00000467263 UCMAQ8WVF2 138 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 APBB2Q92870 758 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 ZKSCAN4Q969J2 545 aaPredicted RBP4.1□□□□□ -1.75
SMC4-207ENST00000467263 MAP7D2Q96T17 732 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 RANGRFQ9HD47 186 aaPredicted RBP4.1□□□□□ -1.75
SMC4-207ENST00000467263 LIMA1Q9UHB6 759 aaKnown RBP4.1□□□□□ -1.75
SMC4-207ENST00000467263 POU2F3Q9UKI9 436 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 KLHL20Q9Y2M5 609 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 OR2W1Q9Y3N9 320 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 MAU2Q9Y6X3 613 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 WDR81Q562E7 1941 aa4.1□□□□□ -1.75
SMC4-207ENST00000467263 B4E171 279 aa4.09□□□□□ -1.75
SMC4-207ENST00000467263 C16orf97H3BN30 126 aa4.09□□□□□ -1.75
SMC4-207ENST00000467263 M0QZ24 198 aa4.09□□□□□ -1.75
SMC4-207ENST00000467263 MBD4O95243 580 aa4.09□□□□□ -1.75
SMC4-207ENST00000467263 IPO7O95373 1038 aaKnown RBP4.09□□□□□ -1.75
SMC4-207ENST00000467263 HSPA1AP0DMV8 641 aaKnown RBP4.09□□□□□ -1.75
SMC4-207ENST00000467263 HSPA1BP0DMV9 641 aaKnown RBP4.09□□□□□ -1.75
SMC4-207ENST00000467263 IL15P40933 162 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms