RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 PFN3P60673 137 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 PEX6Q13608 980 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 PTPRCAPQ14761 206 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 STAT4Q14765 748 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 ANKRD20A4Q4UJ75 823 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 SPANXN3Q5MJ09 141 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 AFTPHQ6ULP2 937 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 GCNT7Q6ZNI0 430 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 PRR23BQ6ZRT6 265 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 SYT12Q8IV01 421 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 DEFB119Q8N690 84 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 GPR161Q8N6U8 529 aaKnown RBP15.11■□□□□ 0.01
NPHP4-205ENST00000466897 MFSD2AQ8NA29 543 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 SCAMP4Q969E2 229 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 MFSD3Q96ES6 412 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 RIOK2Q9BVS4 552 aaKnown RBP15.11■□□□□ 0.01
NPHP4-205ENST00000466897 TEX101Q9BY14 249 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 MBNL1Q9NR56 388 aaKnown RBP15.11■□□□□ 0.01
NPHP4-205ENST00000466897 CD84Q9UIB8 345 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 FKBPLQ9UIM3 349 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 RAB23Q9ULC3 237 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 MAD1L1Q9Y6D9 718 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 RPS6KL1Q9Y6S9 549 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 FAM169AQ9Y6X4 670 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 CACNA1EQ15878 2313 aa15.11■□□□□ 0.01
NPHP4-205ENST00000466897 USP34Q70CQ2 3546 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 A0A1B0GTW7 788 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 ZCWPW2A0A1B0GU75 182 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 A0A1W2PR77 199 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 BCAT2O15382 392 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-205ENST00000466897 GSTA2P09210 222 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 GNSP15586 552 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 ITPKAP23677 461 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 GPR1P46091 355 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 RABIFP47224 123 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 ARSDP51689 593 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 AFF3P51826 1226 aaKnown RBP15.1■□□□□ 0.01
NPHP4-205ENST00000466897 PRAMEP78395 509 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 NFATC2Q13469 925 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 CRYMQ14894 314 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 GPR33Q49SQ1 333 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 ALS2CLQ60I27 953 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 LAIR1Q6GTX8 287 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 RAET1GQ6H3X3 334 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 SNX20Q7Z614 316 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 DCP2Q8IU60 420 aaKnown RBP15.1■□□□□ 0.01
NPHP4-205ENST00000466897 IGDCC3Q8IVU1 814 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 ZBED8Q8IZ13 594 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 RGL4Q8IZJ4 473 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 FBXO36Q8NEA4 188 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 SCG3Q8WXD2 468 aaKnown RBP15.1■□□□□ 0.01
NPHP4-205ENST00000466897 ZNF669Q96BR6 464 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-205ENST00000466897 BMFQ96LC9 184 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 TBATAQ96M53 351 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 SLC6A18Q96N87 628 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 SPATA16Q9BXB7 569 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 TM9SF3Q9HD45 589 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 SAYSD1Q9NPB0 183 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 FZD3Q9NPG1 666 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 SLC2A6Q9UGQ3 507 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 ZC3H7BQ9UGR2 993 aaKnown RBP15.1■□□□□ 0.01
NPHP4-205ENST00000466897 NFU1Q9UMS0 254 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 SMG5Q9UPR3 1016 aaKnown RBP15.1■□□□□ 0.01
NPHP4-205ENST00000466897 CHMP2BQ9UQN3 213 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 PCDH15Q96QU1 1955 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 TMEM131Q92545 1883 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 VPS13AQ96RL7 3174 aa15.1■□□□□ 0.01
NPHP4-205ENST00000466897 TRBV5-4A0A0C4DH59 114 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 POM121BA6NF01 834 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 FADS2P1A8MWK0 482 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 K7ESM1 405 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 VILLO15195 856 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 MAGEC1O60732 1142 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 BANF1O75531 89 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 PCCBP05166 539 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 ITGALP20701 1170 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 MAOBP27338 520 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 ARNTP27540 789 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 CD38P28907 300 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 MC4RP32245 332 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 FOXN2P32314 431 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 MAGEA4P43358 317 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 ARCN1P48444 511 aaKnown RBP15.09■□□□□ 0.01
NPHP4-205ENST00000466897 KIAA1024LP59773 190 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 CDK3Q00526 305 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 CACNG1Q06432 222 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 INPP5AQ14642 412 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 SLMAPQ14BN4 828 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 FASTKD3Q14CZ7 662 aaKnown RBP15.09■□□□□ 0.01
NPHP4-205ENST00000466897 CHRNA6Q15825 494 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 ERCC6LQ2NKX8 1250 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 ATP13A5Q4VNC0 1218 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 ZNF449Q6P9G9 518 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 FAM151BQ6UXP7 276 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 CYS1Q717R9 158 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 ARMCX6Q7L4S7 300 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 LMNTD2Q8IXW0 634 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 PELI3Q8N2H9 469 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 SUMF1Q8NBK3 374 aa15.09■□□□□ 0.01
NPHP4-205ENST00000466897 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms