RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 ZNF114Q8NC26 417 aa3.18□□□□□ -1.9
GARNL3-213ENST00000464616 BARD1Q99728 777 aaKnown RBP3.18□□□□□ -1.9
GARNL3-213ENST00000464616 ITPAQ9BY32 194 aa3.18□□□□□ -1.9
GARNL3-213ENST00000464616 MRPL1Q9BYD6 325 aaKnown RBP3.18□□□□□ -1.9
GARNL3-213ENST00000464616 CXorf56Q9H5V9 222 aa3.18□□□□□ -1.9
GARNL3-213ENST00000464616 WDR6Q9NNW5 1121 aaKnown RBP3.18□□□□□ -1.9
GARNL3-213ENST00000464616 RRP7BPQ9NSQ0 103 aa3.18□□□□□ -1.9
GARNL3-213ENST00000464616 UBA2Q9UBT2 640 aaPredicted RBP3.18□□□□□ -1.9
GARNL3-213ENST00000464616 HSPB7Q9UBY9 170 aa3.18□□□□□ -1.9
GARNL3-213ENST00000464616 SLCO3A1Q9UIG8 710 aa3.18□□□□□ -1.9
GARNL3-213ENST00000464616 SNX8Q9Y5X2 465 aa3.18□□□□□ -1.9
GARNL3-213ENST00000464616 PSAT1Q9Y617 370 aa3.18□□□□□ -1.9
GARNL3-213ENST00000464616 LOC100509620A0A075B734 347 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 CDRT15L2A8MXV6 281 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 A8MZ25 164 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 PTGES3LE9PB15 166 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 TULP2O00295 520 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 VILLO15195 856 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 HCRTR2O43614 444 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 GAGE7O76087 117 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 GFPT2O94808 682 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 PMS2P2O95744 297 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 STARD3NLO95772 234 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 CENPBP07199 599 aaPredicted RBP3.17□□□□□ -1.9
GARNL3-213ENST00000464616 GAGE12FP0CL80 117 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 GAGE12GP0CL81 117 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 GAGE12IP0CL82 117 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 CSH1P0DML2 217 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 CSH2P0DML3 217 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 IGHV4-30-4P0DP06 118 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 SAT1P21673 171 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 TM4SF1P30408 202 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 RYKP34925 604 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 HOXD13P35453 343 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 SNX16P57768 344 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 ERVK11-1P61568 191 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 ECT2LQ008S8 904 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 CREB5Q02930 508 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 FAM27E3Q08E93 113 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 TMEM115Q12893 351 aaPredicted RBP3.17□□□□□ -1.9
GARNL3-213ENST00000464616 GAGE1Q13065 139 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 GAGE4Q13068 117 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 ITGADQ13349 1161 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 TNFAIP1Q13829 316 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 DRAP1Q14919 205 aaPredicted RBP3.17□□□□□ -1.9
GARNL3-213ENST00000464616 RBBP5Q15291 538 aaKnown RBP3.17□□□□□ -1.9
GARNL3-213ENST00000464616 SYT16Q17RD7 645 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 USP41Q3LFD5 358 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 GPATCH4Q5T3I0 446 aaKnown RBP3.17□□□□□ -1.9
GARNL3-213ENST00000464616 CES5AQ6NT32 575 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 KLHL35Q6PF15 583 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 TSSK4Q6SA08 328 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 LURAP1LQ8IV03 231 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 KIAA2013Q8IYS2 634 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 RNF168Q8IYW5 571 aaPredicted RBP3.17□□□□□ -1.9
GARNL3-213ENST00000464616 TMTC2Q8N394 836 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 AADATQ8N5Z0 425 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 BEST2Q8NFU1 509 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 SORCS1Q8WY21 1168 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 ARHGEF26Q96DR7 871 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 CALML4Q96GE6 196 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 C3orf30Q96M34 536 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 TMEM47Q9BQJ4 181 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 MXRA8Q9BRK3 442 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 IFIH1Q9BYX4 1025 aaKnown RBP3.17□□□□□ -1.9
GARNL3-213ENST00000464616 MMP28Q9H239 520 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 TTYH1Q9H313 450 aaPredicted RBP3.17□□□□□ -1.9
GARNL3-213ENST00000464616 GHITMQ9H3K2 345 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 MVB12BQ9H7P6 319 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 UBTD1Q9HAC8 227 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 SLC6A13Q9NSD5 602 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 NKIRAS2Q9NYR9 191 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 SMARCAL1Q9NZC9 954 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 CWC15Q9P013 229 aaKnown RBP3.17□□□□□ -1.9
GARNL3-213ENST00000464616 NLKQ9UBE8 527 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 MORF4L1Q9UBU8 362 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 NDRG3Q9UGV2 375 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 POLG2Q9UHN1 485 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 ERVK-11Q9UQG0 969 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 MAU2Q9Y6X3 613 aa3.17□□□□□ -1.9
GARNL3-213ENST00000464616 FAM237BA0A1B0GVD1 139 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 AKR1B15C9JRZ8 316 aaPredicted RBP3.16□□□□□ -1.9
GARNL3-213ENST00000464616 FAM72CH0Y354 149 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 C16orf97H3BN30 126 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 ATP2C2O75185 946 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 CSPG5O95196 566 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 MLYCDO95822 493 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 MMP2P08253 660 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 SSTR2P30874 369 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 HOXC9P31274 260 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 DCTDP32321 178 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 PIK3CAP42336 1068 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 NEDD9Q14511 834 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 DUSP28Q4G0W2 176 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 SOWAHCQ53LP3 525 aaPredicted RBP3.16□□□□□ -1.9
GARNL3-213ENST00000464616 PPP6R3Q5H9R7 873 aaPredicted RBP3.16□□□□□ -1.9
GARNL3-213ENST00000464616 MFSD4BQ5TF39 518 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 FAM72AQ5TYM5 149 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 ACSM2BQ68CK6 577 aa3.16□□□□□ -1.9
GARNL3-213ENST00000464616 FAM72DQ6L9T8 149 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms