RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 OLIG2Q13516 323 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 SLC1A5Q15758 541 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 P3H1Q32P28 736 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 DOK6Q6PKX4 331 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 ZNF765Q7L2R6 523 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 TMC3Q7Z5M5 1100 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 NLRP8Q86W28 1048 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 MAGOHBQ96A72 148 aaKnown RBP16.96■□□□□ 0.31
VPS52-215ENST00000464425 FICDQ9BVA6 458 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 FSD1LQ9BXM9 530 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 FAM83DQ9H4H8 585 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 CYP4F12Q9HCS2 524 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 CSNK1G3Q9Y6M4 447 aa16.96■□□□□ 0.31
VPS52-215ENST00000464425 INPP4BO15327 924 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 ZNF500O60304 480 aaPredicted RBP16.95■□□□□ 0.3
VPS52-215ENST00000464425 PHF2O75151 1096 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 TRIM16O95361 564 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 CKMT2P17540 419 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 COILP38432 576 aaPredicted RBP16.95■□□□□ 0.3
VPS52-215ENST00000464425 POLD2P49005 469 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 FNTAP49354 379 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 PROX2Q3B8N5 592 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 ALS2CLQ60I27 953 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 ADAMTSL4Q6UY14 1074 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 ARHGEF18Q6ZSZ5 1173 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 TRIM74Q86UV6 250 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 TAB3Q8N5C8 712 aaPredicted RBP16.95■□□□□ 0.3
VPS52-215ENST00000464425 ZNF592Q92610 1267 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 PPP1R2P1Q96PQ5 205 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 APOL2Q9BQE5 337 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 DUSP23Q9BVJ7 150 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 CDC23Q9UJX2 597 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 DOLKQ9UPQ8 538 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 TMEM98Q9Y2Y6 226 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 AAR2Q9Y312 384 aaKnown RBP16.95■□□□□ 0.3
VPS52-215ENST00000464425 DGKBQ9Y6T7 804 aa16.95■□□□□ 0.3
VPS52-215ENST00000464425 GOLGA4Q13439 2230 aaKnown RBP16.94■□□□□ 0.3
VPS52-215ENST00000464425 RGSL1A5PLK6 1076 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 LMO7DNF2Z398 122 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 CCDC188H7C350 402 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 TNFRSF10CO14798 259 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 YY2O15391 372 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 URI1O94763 535 aaPredicted RBP16.94■□□□□ 0.3
VPS52-215ENST00000464425 FUCA1P04066 466 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 CEACAM5P06731 702 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 ANXA6P08133 673 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 HLA-DPA1P20036 260 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 TEAD1P28347 426 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 KCNJ1P48048 391 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 DAB2P98082 770 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 SPARCL1Q14515 664 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 ELOCQ15369 112 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 PARP6Q2NL67 630 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 TTC27Q6P3X3 843 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 CCDC137Q6PK04 289 aaKnown RBP16.94■□□□□ 0.3
VPS52-215ENST00000464425 C4orf22Q6V702 233 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 RAVER1Q8IY67 606 aaKnown RBP16.94■□□□□ 0.3
VPS52-215ENST00000464425 FSTL5Q8N475 847 aaPredicted RBP16.94■□□□□ 0.3
VPS52-215ENST00000464425 BLOC1S5Q8TDH9 187 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 PTCD2Q8WV60 388 aaKnown RBP16.94■□□□□ 0.3
VPS52-215ENST00000464425 ADAMTS14Q8WXS8 1223 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 HIC2Q96JB3 615 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 APOLD1Q96LR9 279 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 TBATAQ96M53 351 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 SRPK1Q96SB4 655 aaKnown RBP16.94■□□□□ 0.3
VPS52-215ENST00000464425 TMEM168Q9H0V1 697 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 CARS2Q9HA77 564 aaKnown RBP16.94■□□□□ 0.3
VPS52-215ENST00000464425 BPIFA1Q9NP55 256 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 ANGPTL2Q9UKU9 493 aa16.94■□□□□ 0.3
VPS52-215ENST00000464425 PRSS38A1L453 326 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 FADS2P1A8MWK0 482 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 ESPNB1AK53 854 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 TPP1O14773 563 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 USP12O75317 370 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 METTL18O95568 372 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 PYGLP06737 847 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 ADRA1AP35348 466 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 ACTN2P35609 894 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 ACADVLP49748 655 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 HENMT1Q5T8I9 393 aaKnown RBP16.93■□□□□ 0.3
VPS52-215ENST00000464425 DHRS13Q6UX07 377 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 GSTA5Q7RTV2 222 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 ZNF572Q7Z3I7 529 aaPredicted RBP16.93■□□□□ 0.3
VPS52-215ENST00000464425 RAB44Q7Z6P3 723 aaPredicted RBP16.93■□□□□ 0.3
VPS52-215ENST00000464425 CCDC89Q8N998 374 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 GPR26Q8NDV2 337 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 GRK7Q8WTQ7 553 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 SLCO2A1Q92959 643 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 RUNDC3BQ96NL0 473 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 SCNM1Q9BWG6 230 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 SPATA16Q9BXB7 569 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 FRMD8Q9BZ67 464 aaPredicted RBP16.93■□□□□ 0.3
VPS52-215ENST00000464425 PCYOX1Q9UHG3 505 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 CNOT6Q9ULM6 557 aaKnown RBP16.93■□□□□ 0.3
VPS52-215ENST00000464425 SUFUQ9UMX1 484 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 WASF3Q9UPY6 502 aa16.93■□□□□ 0.3
VPS52-215ENST00000464425 LY6G6EA0A0G2JKS1 128 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 BUD23O43709 281 aaKnown RBP16.92■□□□□ 0.3
VPS52-215ENST00000464425 RFPL3O75679 317 aa16.92■□□□□ 0.3
VPS52-215ENST00000464425 DKK1O94907 266 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms