RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 ZBTB17Q13105 803 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 CLN3Q13286 438 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 BIRC2Q13490 618 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 PEX6Q13608 980 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 QPCTQ16769 361 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 KIF26BQ2KJY2 2108 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 PYCR3Q53H96 274 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 ZNF438Q7Z4V0 828 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 PIM3Q86V86 326 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 SLITRK4Q8IW52 837 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 RAVER1Q8IY67 606 aaKnown RBP18.75■□□□□ 0.59
SF3A1-205ENST00000463818 NAGSQ8N159 534 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.75■□□□□ 0.59
SF3A1-205ENST00000463818 COX14Q96I36 57 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 OR2M4Q96R27 311 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 WDR24Q96S15 920 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 LYSMD1Q96S90 227 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 MLPHQ9BV36 600 aaPredicted RBP18.75■□□□□ 0.59
SF3A1-205ENST00000463818 SEMA6CQ9H3T2 930 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 TSPY26PQ9H489 355 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.75■□□□□ 0.59
SF3A1-205ENST00000463818 PISDQ9UG56 409 aa18.75■□□□□ 0.59
SF3A1-205ENST00000463818 BAHCC1Q9P281 2608 aa18.74■□□□□ 0.59
SF3A1-205ENST00000463818 ANKRD66B4E2M5 251 aa18.74■□□□□ 0.59
SF3A1-205ENST00000463818 APOL1O14791 398 aa18.74■□□□□ 0.59
SF3A1-205ENST00000463818 MFAP3LO75121 409 aa18.74■□□□□ 0.59
SF3A1-205ENST00000463818 MTA2O94776 668 aa18.74■□□□□ 0.59
SF3A1-205ENST00000463818 ASMTLO95671 621 aa18.74■□□□□ 0.59
SF3A1-205ENST00000463818 IFI35P80217 286 aaPredicted RBP18.74■□□□□ 0.59
SF3A1-205ENST00000463818 RHDQ02161 417 aa18.74■□□□□ 0.59
SF3A1-205ENST00000463818 AP1B1Q10567 949 aa18.74■□□□□ 0.59
SF3A1-205ENST00000463818 PHF19Q5T6S3 580 aa18.74■□□□□ 0.59
SF3A1-205ENST00000463818 SLC9A4Q6AI14 798 aa18.74■□□□□ 0.59
SF3A1-205ENST00000463818 PCSK4Q6UW60 755 aa18.74■□□□□ 0.59
SF3A1-205ENST00000463818 RHOT2Q8IXI1 618 aa18.74■□□□□ 0.59
SF3A1-205ENST00000463818 RNF214Q8ND24 703 aa18.74■□□□□ 0.59
SF3A1-205ENST00000463818 TMEM159Q96B96 161 aa18.74■□□□□ 0.59
SF3A1-205ENST00000463818 CDH19Q9H159 772 aa18.74■□□□□ 0.59
SF3A1-205ENST00000463818 FAM83DQ9H4H8 585 aa18.74■□□□□ 0.59
SF3A1-205ENST00000463818 RDH14Q9HBH5 336 aa18.74■□□□□ 0.59
SF3A1-205ENST00000463818 WDR70Q9NW82 654 aa18.74■□□□□ 0.59
SF3A1-205ENST00000463818 CNOT6Q9ULM6 557 aaKnown RBP18.74■□□□□ 0.59
SF3A1-205ENST00000463818 UNC13CQ8NB66 2214 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 TRBV23OR9-2A0A075B6M9 112 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 C1orf232A0A0U1RR37 186 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 PPM1DO15297 605 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 NVLO15381 856 aaKnown RBP18.73■□□□□ 0.59
SF3A1-205ENST00000463818 ZW10O43264 779 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 CPNE6O95741 557 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 TNNT1P13805 278 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 ITIH1P19827 911 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 CD1CP29017 333 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 GPR3P46089 330 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 SPINT3P49223 89 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 C19orf57Q0VDD7 668 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 NR1D2Q14995 579 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 MAP9Q49MG5 647 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 TAF1BQ53T94 588 aaPredicted RBP18.73■□□□□ 0.59
SF3A1-205ENST00000463818 LRRC38Q5VT99 294 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 NPNTQ6UXI9 565 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 ZNF574Q6ZN55 896 aaPredicted RBP18.73■□□□□ 0.59
SF3A1-205ENST00000463818 VSIG1Q86XK7 387 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 GALNT13Q8IUC8 556 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 CCHCR1Q8TD31 782 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 SNRNP27Q8WVK2 155 aaKnown RBP18.73■□□□□ 0.59
SF3A1-205ENST00000463818 RNF25Q96BH1 459 aaPredicted RBP18.73■□□□□ 0.59
SF3A1-205ENST00000463818 CMKLR1Q99788 373 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 ADGRE3Q9BY15 652 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 CEP41Q9BYV8 373 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 ZNHIT2Q9UHR6 403 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 SHROOM3Q8TF72 1996 aa18.73■□□□□ 0.59
SF3A1-205ENST00000463818 K7ENP7 123 aa18.72■□□□□ 0.59
SF3A1-205ENST00000463818 ERVH48-1M5A8F1 160 aa18.72■□□□□ 0.59
SF3A1-205ENST00000463818 KRT1P04264 644 aa18.72■□□□□ 0.59
SF3A1-205ENST00000463818 ATP1A1P05023 1023 aaKnown RBP18.72■□□□□ 0.59
SF3A1-205ENST00000463818 ZFXP17010 805 aaPredicted RBP18.72■□□□□ 0.59
SF3A1-205ENST00000463818 ETV5P41161 510 aa18.72■□□□□ 0.59
SF3A1-205ENST00000463818 PDK1Q15118 436 aa18.72■□□□□ 0.59
SF3A1-205ENST00000463818 ODF2Q5BJF6 829 aa18.72■□□□□ 0.59
SF3A1-205ENST00000463818 INO80CQ6PI98 192 aaPredicted RBP18.72■□□□□ 0.59
SF3A1-205ENST00000463818 CCDC81Q6ZN84 652 aa18.72■□□□□ 0.59
SF3A1-205ENST00000463818 B4GALNT4Q76KP1 1039 aa18.72■□□□□ 0.59
SF3A1-205ENST00000463818 KDELC2Q7Z4H8 507 aa18.72■□□□□ 0.59
SF3A1-205ENST00000463818 RFX6Q8HWS3 928 aa18.72■□□□□ 0.59
SF3A1-205ENST00000463818 NUDT22Q9BRQ3 303 aa18.72■□□□□ 0.59
SF3A1-205ENST00000463818 PKD2L2Q9NZM6 624 aa18.72■□□□□ 0.59
SF3A1-205ENST00000463818 SEPT10Q9P0V9 454 aa18.72■□□□□ 0.59
SF3A1-205ENST00000463818 HYOU1Q9Y4L1 999 aa18.72■□□□□ 0.59
SF3A1-205ENST00000463818 OAS3Q9Y6K5 1087 aaKnown RBP18.72■□□□□ 0.59
SF3A1-205ENST00000463818 BPTFQ12830 3046 aa18.72■□□□□ 0.59
SF3A1-205ENST00000463818 ARHGEF17Q96PE2 2063 aaPredicted RBP18.71■□□□□ 0.59
SF3A1-205ENST00000463818 RGSL1A5PLK6 1076 aa18.71■□□□□ 0.59
SF3A1-205ENST00000463818 AKR1B15C9JRZ8 316 aaPredicted RBP18.71■□□□□ 0.59
SF3A1-205ENST00000463818 EFSO43281 561 aa18.71■□□□□ 0.59
SF3A1-205ENST00000463818 DNAJC6O75061 913 aa18.71■□□□□ 0.59
SF3A1-205ENST00000463818 C1QL1O75973 258 aa18.71■□□□□ 0.59
SF3A1-205ENST00000463818 SLC1A1P43005 524 aa18.71■□□□□ 0.59
SF3A1-205ENST00000463818 MAPK10P53779 464 aa18.71■□□□□ 0.59
SF3A1-205ENST00000463818 GALNT3Q14435 633 aa18.71■□□□□ 0.59
SF3A1-205ENST00000463818 C16orf72Q14CZ0 275 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms