RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 TMCO4Q5TGY1 634 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 DCUN1D2Q6PH85 259 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 ADAMTSL4Q6UY14 1074 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 USP45Q70EL2 814 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 SLC9B2Q86UD5 537 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 PLXDC1Q8IUK5 500 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 ARHGAP12Q8IWW6 846 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 NDUFAF2Q8N183 169 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 AP2M1Q96CW1 435 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 SCRN2Q96FV2 425 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 ZNF599Q96NL3 588 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 EIF3CQ99613 913 aaKnown RBP14.37□□□□□ -0.11
SMC1A-204ENST00000463684 EPB41L1Q9H4G0 881 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 DHX35Q9H5Z1 703 aaKnown RBP14.37□□□□□ -0.11
SMC1A-204ENST00000463684 SEPT11Q9NVA2 429 aaKnown RBP14.37□□□□□ -0.11
SMC1A-204ENST00000463684 CUEDC1Q9NWM3 386 aaPredicted RBP14.37□□□□□ -0.11
SMC1A-204ENST00000463684 CNOT8Q9UFF9 292 aaKnown RBP14.37□□□□□ -0.11
SMC1A-204ENST00000463684 CD84Q9UIB8 345 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 NOTCH2Q04721 2471 aa14.37□□□□□ -0.11
SMC1A-204ENST00000463684 ARHGEF17Q96PE2 2063 aaPredicted RBP14.37□□□□□ -0.11
SMC1A-204ENST00000463684 PIPSLA2A3N6 862 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 CDC14CA4D256 554 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 NPIPB15A6NHN6 443 aaPredicted RBP14.36□□□□□ -0.11
SMC1A-204ENST00000463684 EML2O95834 649 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 PYGLP06737 847 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 FURINP09958 794 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 CCNYL3P0C7X3 344 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 SLC2A4P14672 509 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 ERCC2P18074 760 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 HSPA9P38646 679 aaKnown RBP14.36□□□□□ -0.11
SMC1A-204ENST00000463684 ERMARDQ5T6L9 678 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 IYDQ6PHW0 289 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 RFX8Q6ZV50 586 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 CHST15Q7LFX5 561 aaPredicted RBP14.36□□□□□ -0.11
SMC1A-204ENST00000463684 LYSMD3Q7Z3D4 306 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 TECPR1Q7Z6L1 1165 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 TSPAN33Q86UF1 283 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 TRIM74Q86UV6 250 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 BBS5Q8N3I7 341 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 FNIP1Q8TF40 1166 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 STAMBPL1Q96FJ0 436 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 NUDCD1Q96RS6 583 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 TWSG1Q9GZX9 223 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 ABCG8Q9H221 673 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 GANQ9H2C0 597 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 NLRC4Q9NPP4 1024 aa14.36□□□□□ -0.11
SMC1A-204ENST00000463684 SPTAN1Q13813 2472 aaKnown RBP14.35□□□□□ -0.11
SMC1A-204ENST00000463684 ANKRD34CP0C6C1 535 aa14.35□□□□□ -0.11
SMC1A-204ENST00000463684 PMS2P54278 862 aa14.35□□□□□ -0.11
SMC1A-204ENST00000463684 CA9Q16790 459 aa14.35□□□□□ -0.11
SMC1A-204ENST00000463684 ARMC12Q5T9G4 340 aa14.35□□□□□ -0.11
SMC1A-204ENST00000463684 MON1BQ7L1V2 547 aa14.35□□□□□ -0.11
SMC1A-204ENST00000463684 NLRP8Q86W28 1048 aa14.35□□□□□ -0.11
SMC1A-204ENST00000463684 RASGRP3Q8IV61 690 aa14.35□□□□□ -0.11
SMC1A-204ENST00000463684 GALNT6Q8NCL4 622 aa14.35□□□□□ -0.11
SMC1A-204ENST00000463684 EXD1Q8NHP7 514 aa14.35□□□□□ -0.11
SMC1A-204ENST00000463684 HERPUD2Q9BSE4 406 aa14.35□□□□□ -0.11
SMC1A-204ENST00000463684 NOD2Q9HC29 1040 aa14.35□□□□□ -0.11
SMC1A-204ENST00000463684 FAM207AQ9NSI2 230 aaPredicted RBP14.35□□□□□ -0.11
SMC1A-204ENST00000463684 TBC1D29Q9UFV1 150 aa14.35□□□□□ -0.11
SMC1A-204ENST00000463684 OAS3Q9Y6K5 1087 aaKnown RBP14.35□□□□□ -0.11
SMC1A-204ENST00000463684 USP9XQ93008 2570 aaPredicted RBP14.35□□□□□ -0.11
SMC1A-204ENST00000463684 KIR2DS5A0A0G2JLQ3 304 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 A0A0G2JNG1 304 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 TCRBV5S1A1TA0A578 114 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 A1L4Q6 167 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 KIR2DS3K7RE56 304 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 SNX2O60749 519 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 SEMA7AO75326 666 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 CREG1O75629 220 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 DDAH2O95865 285 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 RECKO95980 971 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 SOD1P00441 154 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 ZNF28P17035 718 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 CTPS1P17812 591 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 JAM2P57087 298 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 TRAF2Q12933 501 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 IL11RAQ14626 422 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 KIR2DS5Q14953 304 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 PTPRRQ15256 657 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 TCP11X2Q5H9J9 407 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 PPP6R3Q5H9R7 873 aaPredicted RBP14.34□□□□□ -0.11
SMC1A-204ENST00000463684 RALGPS1Q5JS13 557 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 TMEM135Q86UB9 458 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 APLFQ8IW19 511 aaPredicted RBP14.34□□□□□ -0.11
SMC1A-204ENST00000463684 NPWQ8N729 165 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 AVL9Q8NBF6 648 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 NSMCE1Q8WV22 266 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 SCAMP4Q969E2 229 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 RNF31Q96EP0 1072 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 C9orf72Q96LT7 481 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 OR6C1Q96RD1 312 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 MCCC1Q96RQ3 725 aaPredicted RBP14.34□□□□□ -0.11
SMC1A-204ENST00000463684 TBC1D10AQ9BXI6 508 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 SIDT1Q9NXL6 827 aaKnown RBP14.34□□□□□ -0.11
SMC1A-204ENST00000463684 PCSK1NQ9UHG2 260 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 DACH1Q9UI36 760 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 PADI1Q9ULC6 663 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 PPIL1Q9Y3C6 166 aa14.34□□□□□ -0.11
SMC1A-204ENST00000463684 PRKAB1Q9Y478 270 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms