RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 HLCSP50747 726 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 COL4A4P53420 1690 aaPredicted RBP18.39■□□□□ 0.53
HPS3-204ENST00000462030 ADARB1P78563 741 aaKnown RBP18.39■□□□□ 0.53
HPS3-204ENST00000462030 CDC42EP1Q00587 391 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 DUSP28Q4G0W2 176 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 PAGE3Q5JUK9 113 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 TWF2Q6IBS0 349 aaKnown RBP18.39■□□□□ 0.53
HPS3-204ENST00000462030 TIGD7Q6NT04 549 aaPredicted RBP18.39■□□□□ 0.53
HPS3-204ENST00000462030 COLGALT2Q8IYK4 626 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 CENPSQ8N2Z9 138 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 CATSPERBQ9H7T0 1116 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 ARNT2Q9HBZ2 717 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 NT5MQ9NPB1 228 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 SLAMF8Q9P0V8 285 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 BLOC1S6Q9UL45 172 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 CORINQ9Y5Q5 1042 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 FUOMA2VDF0 154 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 BAIAP3O94812 1187 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 MTHFD2P13995 350 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 CLCNKBP51801 687 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 TIAL1Q01085 375 aaKnown RBP eCLIP18.39■□□□□ 0.53
HPS3-204ENST00000462030 RELAQ04206 551 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 ITKQ08881 620 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 ATP1A4Q13733 1029 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 ZNF549Q6P9A3 640 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 C16orf87Q6PH81 154 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 TERB1Q8NA31 727 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 SCAMP5Q8TAC9 235 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 SLC16A10Q8TF71 515 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 PPP1R2P1Q96PQ5 205 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 TSPAN18Q96SJ8 248 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 MTG1Q9BT17 334 aaPredicted RBP18.39■□□□□ 0.53
HPS3-204ENST00000462030 TRIM54Q9BYV2 358 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 PIF1Q9H611 641 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 ZFYVE28Q9HCC9 887 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 ATP13A1Q9HD20 1204 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 INTS10Q9NVR2 710 aaKnown RBP18.39■□□□□ 0.53
HPS3-204ENST00000462030 PKD2L2Q9NZM6 624 aa18.39■□□□□ 0.53
HPS3-204ENST00000462030 FGF10O15520 208 aaPredicted RBP18.38■□□□□ 0.53
HPS3-204ENST00000462030 CLASP2O75122 1294 aaKnown RBP18.38■□□□□ 0.53
HPS3-204ENST00000462030 MOCS2O96007 188 aaPredicted RBP18.38■□□□□ 0.53
HPS3-204ENST00000462030 CYP2C18P33260 490 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 PGFP49763 221 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 EIF4EBP2Q13542 120 aaPredicted RBP18.38■□□□□ 0.53
HPS3-204ENST00000462030 ZIK1Q3SY52 487 aaPredicted RBP18.38■□□□□ 0.53
HPS3-204ENST00000462030 CCNYL2Q5T2Q4 361 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 C14orf80Q86SX3 495 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 OR13F1Q8NGS4 319 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 KLHL5Q96PQ7 755 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 SLC25A51Q9H1U9 297 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 MFSD1Q9H3U5 465 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 FANCEQ9HB96 536 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 PFDN4Q9NQP4 134 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 INIPQ9NRY2 104 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 NUDT5Q9UKK9 219 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 GPR45Q9Y5Y3 372 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 MBLAC1A4D2B0 266 aaPredicted RBP18.38■□□□□ 0.53
HPS3-204ENST00000462030 H0Y858 1186 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 SLC7A4O43246 635 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 CPNE6O95741 557 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 LDLRP01130 860 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 FAM163BP0C2L3 166 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 ZNF12P17014 697 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 FDXRP22570 491 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 FOXM1Q08050 763 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 MOGQ16653 247 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 PTRH1Q86Y79 214 aaKnown RBP18.38■□□□□ 0.53
HPS3-204ENST00000462030 KIAA2013Q8IYS2 634 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 GABPB2Q8TAK5 448 aaPredicted RBP18.38■□□□□ 0.53
HPS3-204ENST00000462030 PABPC5Q96DU9 382 aaKnown RBP18.38■□□□□ 0.53
HPS3-204ENST00000462030 CSNK1G1Q9HCP0 422 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 C8orf4Q9NR00 106 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 TLR9Q9NR96 1032 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 SELENONQ9NZV5 590 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 CDH9Q9ULB4 789 aa18.38■□□□□ 0.53
HPS3-204ENST00000462030 A0A1W2PP18 115 aa18.37■□□□□ 0.53
HPS3-204ENST00000462030 TMEM221A6NGB7 291 aa18.37■□□□□ 0.53
HPS3-204ENST00000462030 NOL3O60936 208 aaKnown RBP18.37■□□□□ 0.53
HPS3-204ENST00000462030 PEX11BO96011 259 aa18.37■□□□□ 0.53
HPS3-204ENST00000462030 MAP4P27816 1152 aaKnown RBP18.37■□□□□ 0.53
HPS3-204ENST00000462030 SLC26A3P40879 764 aa18.37■□□□□ 0.53
HPS3-204ENST00000462030 CASP2P42575 452 aa18.37■□□□□ 0.53
HPS3-204ENST00000462030 ZFP36L2P47974 494 aaKnown RBP18.37■□□□□ 0.53
HPS3-204ENST00000462030 DSC2Q02487 901 aa18.37■□□□□ 0.53
HPS3-204ENST00000462030 GRSF1Q12849 480 aaKnown RBP eCLIP18.37■□□□□ 0.53
HPS3-204ENST00000462030 PTPRCAPQ14761 206 aa18.37■□□□□ 0.53
HPS3-204ENST00000462030 OTUD3Q5T2D3 398 aaPredicted RBP18.37■□□□□ 0.53
HPS3-204ENST00000462030 GALNT7Q86SF2 657 aa18.37■□□□□ 0.53
HPS3-204ENST00000462030 RNF168Q8IYW5 571 aaPredicted RBP18.37■□□□□ 0.53
HPS3-204ENST00000462030 TBC1D21Q8IYX1 336 aa18.37■□□□□ 0.53
HPS3-204ENST00000462030 SLC15A4Q8N697 577 aa18.37■□□□□ 0.53
HPS3-204ENST00000462030 PAPD5Q8NDF8 572 aaKnown RBP18.37■□□□□ 0.53
HPS3-204ENST00000462030 IMP4Q96G21 291 aaKnown RBP18.37■□□□□ 0.53
HPS3-204ENST00000462030 MUS81Q96NY9 551 aa18.37■□□□□ 0.53
HPS3-204ENST00000462030 ARMC7Q9H6L4 198 aa18.37■□□□□ 0.53
HPS3-204ENST00000462030 TIMM22Q9Y584 194 aa18.37■□□□□ 0.53
HPS3-204ENST00000462030 PCDHGA4Q9Y5G9 962 aa18.37■□□□□ 0.53
HPS3-204ENST00000462030 TREHO43280 583 aa18.37■□□□□ 0.53
HPS3-204ENST00000462030 IDO1P14902 403 aa18.37■□□□□ 0.53
HPS3-204ENST00000462030 CCNA2P20248 432 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms