RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 FAM182AQ5T1J6 154 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 RAB11FIP2Q7L804 512 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 GPR155Q7Z3F1 870 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 ZNF438Q7Z4V0 828 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 FBXO39Q8N4B4 442 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 TC2NQ8N9U0 490 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 EXD1Q8NHP7 514 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 OR2M4Q96R27 311 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 WDR24Q96S15 920 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 UBL7Q96S82 380 aaPredicted RBP18.84■□□□□ 0.61
VARS-220ENST00000461874 ANP32EQ9BTT0 268 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 MLPHQ9BV36 600 aaPredicted RBP18.84■□□□□ 0.61
VARS-220ENST00000461874 ADGRE3Q9BY15 652 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 BRD8Q9H0E9 1235 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 CDH19Q9H159 772 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 PLEKHM1Q9Y4G2 1056 aa18.84■□□□□ 0.61
VARS-220ENST00000461874 RGSL1A5PLK6 1076 aa18.83■□□□□ 0.6
VARS-220ENST00000461874 PPP1R12AO14974 1030 aaPredicted RBP18.83■□□□□ 0.6
VARS-220ENST00000461874 INPP4BO15327 924 aa18.83■□□□□ 0.6
VARS-220ENST00000461874 KLK10O43240 276 aa18.83■□□□□ 0.6
VARS-220ENST00000461874 B4GAT1O43505 415 aa18.83■□□□□ 0.6
VARS-220ENST00000461874 SPOPO43791 374 aa18.83■□□□□ 0.6
VARS-220ENST00000461874 ECEL1O95672 775 aa18.83■□□□□ 0.6
VARS-220ENST00000461874 UGT1A5P35504 534 aa18.83■□□□□ 0.6
VARS-220ENST00000461874 SPINT3P49223 89 aa18.83■□□□□ 0.6
VARS-220ENST00000461874 BROXQ5VW32 411 aa18.83■□□□□ 0.6
VARS-220ENST00000461874 MFSD7Q6UXD7 560 aa18.83■□□□□ 0.6
VARS-220ENST00000461874 NT5DC3Q86UY8 548 aa18.83■□□□□ 0.6
VARS-220ENST00000461874 NAGSQ8N159 534 aa18.83■□□□□ 0.6
VARS-220ENST00000461874 CCHCR1Q8TD31 782 aa18.83■□□□□ 0.6
VARS-220ENST00000461874 CCDC97Q96F63 343 aaPredicted RBP18.83■□□□□ 0.6
VARS-220ENST00000461874 IMP4Q96G21 291 aaKnown RBP18.83■□□□□ 0.6
VARS-220ENST00000461874 AGAP3Q96P47 875 aa18.83■□□□□ 0.6
VARS-220ENST00000461874 CEP41Q9BYV8 373 aa18.83■□□□□ 0.6
VARS-220ENST00000461874 TRIM5Q9C035 493 aa18.83■□□□□ 0.6
VARS-220ENST00000461874 FAM83DQ9H4H8 585 aa18.83■□□□□ 0.6
VARS-220ENST00000461874 CNOT6Q9ULM6 557 aaKnown RBP18.83■□□□□ 0.6
VARS-220ENST00000461874 SSUH2Q9Y2M2 353 aa18.83■□□□□ 0.6
VARS-220ENST00000461874 RHPN2P1A8MT19 583 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 ACTR1BP42025 376 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 CDKN2BP42772 138 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 MAGEA1P43355 309 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 HADHBP55084 474 aaKnown RBP18.82■□□□□ 0.6
VARS-220ENST00000461874 UCNP55089 124 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 OR1D5P58170 312 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 ACTR1AP61163 376 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 DYNLT1P63172 113 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 CXADRP78310 365 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 COL9A2Q14055 689 aaPredicted RBP18.82■□□□□ 0.6
VARS-220ENST00000461874 NR1D2Q14995 579 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 TAZQ16635 292 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 HENMT1Q5T8I9 393 aaKnown RBP18.82■□□□□ 0.6
VARS-220ENST00000461874 MARK2Q7KZI7 788 aaKnown RBP18.82■□□□□ 0.6
VARS-220ENST00000461874 TMPRSS9Q7Z410 1059 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 GALNT13Q8IUC8 556 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 SLITRK4Q8IW52 837 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 PATE1Q8WXA2 126 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 TADA1Q96BN2 335 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 TRIB3Q96RU7 358 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 SLC25A51Q9H1U9 297 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 PKD2L2Q9NZM6 624 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 SEPT10Q9P0V9 454 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 AHCTF1Q8WYP5 2266 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 MGAQ8IWI9 3026 aa18.82■□□□□ 0.6
VARS-220ENST00000461874 TEX51A0A1B0GUA7 166 aa18.81■□□□□ 0.6
VARS-220ENST00000461874 LCA5LO95447 670 aa18.81■□□□□ 0.6
VARS-220ENST00000461874 ASMTLO95671 621 aa18.81■□□□□ 0.6
VARS-220ENST00000461874 HGFP14210 728 aa18.81■□□□□ 0.6
VARS-220ENST00000461874 ALDH4A1P30038 563 aa18.81■□□□□ 0.6
VARS-220ENST00000461874 NOP2P46087 812 aaKnown RBP18.81■□□□□ 0.6
VARS-220ENST00000461874 NR2C2P49116 596 aa18.81■□□□□ 0.6
VARS-220ENST00000461874 TMPRSS3P57727 454 aa18.81■□□□□ 0.6
VARS-220ENST00000461874 LRP8Q14114 963 aa18.81■□□□□ 0.6
VARS-220ENST00000461874 TFDP2Q14188 446 aa18.81■□□□□ 0.6
VARS-220ENST00000461874 GALNT3Q14435 633 aa18.81■□□□□ 0.6
VARS-220ENST00000461874 B4GALNT4Q76KP1 1039 aa18.81■□□□□ 0.6
VARS-220ENST00000461874 LYSMD3Q7Z3D4 306 aa18.81■□□□□ 0.6
VARS-220ENST00000461874 EID2BQ96D98 161 aa18.81■□□□□ 0.6
VARS-220ENST00000461874 VPS18Q9P253 973 aa18.81■□□□□ 0.6
VARS-220ENST00000461874 LOXL2Q9Y4K0 774 aa18.81■□□□□ 0.6
VARS-220ENST00000461874 PCDHGA7Q9Y5G6 932 aa18.81■□□□□ 0.6
VARS-220ENST00000461874 ALG6Q9Y672 507 aa18.81■□□□□ 0.6
VARS-220ENST00000461874 OAS3Q9Y6K5 1087 aaKnown RBP18.81■□□□□ 0.6
VARS-220ENST00000461874 FADS2P1A8MWK0 482 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 ZW10O43264 779 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 PSTPIP1O43586 416 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 DNAJC6O75061 913 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 CPNE6O95741 557 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 ATP1A1P05023 1023 aaKnown RBP18.8■□□□□ 0.6
VARS-220ENST00000461874 SLC5A2P31639 672 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 GPR3P46089 330 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 PRKD1Q15139 912 aaPredicted RBP18.8■□□□□ 0.6
VARS-220ENST00000461874 SLC14A2Q15849 920 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 CLPPQ16740 277 aaPredicted RBP18.8■□□□□ 0.6
VARS-220ENST00000461874 AMZ1Q400G9 498 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 TEX44Q53QW1 395 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 SPOCD1Q6ZMY3 1216 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 BZW1Q7L1Q6 419 aaKnown RBP18.8■□□□□ 0.6
VARS-220ENST00000461874 KDELC2Q7Z4H8 507 aa18.8■□□□□ 0.6
VARS-220ENST00000461874 PIM3Q86V86 326 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms