RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 TEAD1P28347 426 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 FDFT1P37268 417 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 CLDN2P57739 230 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 PFN3P60673 137 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 YPEL5P62699 121 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 SLC1A5Q15758 541 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 ZNF423Q2M1K9 1284 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 SIRPB2Q5JXA9 342 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 CAPRIN2Q6IMN6 1127 aaKnown RBP11.06□□□□□ -0.64
APTX-209ENST00000460940 ESRP1Q6NXG1 681 aaKnown RBP11.06□□□□□ -0.64
APTX-209ENST00000460940 LAYNQ6UX15 382 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 HSD11B1LQ7Z5J1 315 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 NRSN1Q8IZ57 195 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 MINDY1Q8N5J2 469 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 OR13H1Q8NG92 308 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 GTPBP2Q9BX10 602 aaKnown RBP11.06□□□□□ -0.64
APTX-209ENST00000460940 LRRC40Q9H9A6 602 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 DNAAF2Q9NVR5 837 aaKnown RBP11.06□□□□□ -0.64
APTX-209ENST00000460940 CA5BQ9Y2D0 317 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 C15orf41Q9Y2V0 281 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 SNX11Q9Y5W9 270 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 POM121BA6NF01 834 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 H0Y8X5 98 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 METTL18O95568 372 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 C1SP09871 688 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 GM2AP17900 193 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 ADRA1AP35348 466 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 ETV3P41162 512 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 SCTRP47872 440 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 DPTQ07507 201 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 CDKN3Q16667 212 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 HLA-BQ31612 363 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 Q6ZSR6 202 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 GSTA5Q7RTV2 222 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 KDELC2Q7Z4H8 507 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 TECPR1Q7Z6L1 1165 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 NLRP8Q86W28 1048 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 APLFQ8IW19 511 aaPredicted RBP11.06□□□□□ -0.64
APTX-209ENST00000460940 IQCKQ8N0W5 287 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 DRAXINQ8NBI3 349 aaPredicted RBP11.06□□□□□ -0.64
APTX-209ENST00000460940 BMFQ96LC9 184 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 ZIM3Q96PE6 472 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 FICDQ9BVA6 458 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 CDH19Q9H159 772 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 ZFYVE1Q9HBF4 777 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 FSCN3Q9NQT6 498 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 RAD18Q9NS91 495 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 PKD2L2Q9NZM6 624 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 RNF14Q9UBS8 474 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 ZNF711Q9Y462 761 aa11.06□□□□□ -0.64
APTX-209ENST00000460940 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.05□□□□□ -0.64
APTX-209ENST00000460940 CDX4O14627 284 aaPredicted RBP11.05□□□□□ -0.64
APTX-209ENST00000460940 ZNF185O15231 689 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 PHF2O75151 1096 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 AP2A1O95782 977 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 PCCBP05166 539 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 GSTA1P08263 222 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 TSHRP16473 764 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 ARRB1P49407 418 aaPredicted RBP11.05□□□□□ -0.64
APTX-209ENST00000460940 CCT8P50990 548 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 PTSQ03393 145 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 SLC14A1Q13336 389 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 PTK2BQ14289 1009 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 STPG1Q5TH74 334 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 DENND2CQ68D51 928 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 KCTD11Q693B1 232 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 RANBP10Q6VN20 620 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 LYSMD3Q7Z3D4 306 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 LINC00523Q86TU6 105 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 ATL2Q8NHH9 583 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 MAGOHBQ96A72 148 aaKnown RBP11.05□□□□□ -0.64
APTX-209ENST00000460940 ATP6V1G3Q96LB4 118 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 SMIM14Q96QK8 99 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 ELF4Q99607 663 aaPredicted RBP11.05□□□□□ -0.64
APTX-209ENST00000460940 TBL1YQ9BQ87 522 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 AP1M1Q9BXS5 423 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 GAREM1Q9H706 876 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 ARNT2Q9HBZ2 717 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 MBNL1Q9NR56 388 aaKnown RBP11.05□□□□□ -0.64
APTX-209ENST00000460940 RXFP3Q9NSD7 469 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 NFKBIL1Q9UBC1 381 aaPredicted RBP11.05□□□□□ -0.64
APTX-209ENST00000460940 CDV3Q9UKY7 258 aaKnown RBP11.05□□□□□ -0.64
APTX-209ENST00000460940 PCDHGB2Q9Y5G2 931 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 KNL1Q8NG31 2342 aa11.05□□□□□ -0.64
APTX-209ENST00000460940 PDE2AO00408 941 aaPredicted RBP11.04□□□□□ -0.64
APTX-209ENST00000460940 GDF9O60383 454 aa11.04□□□□□ -0.64
APTX-209ENST00000460940 CLDN7O95471 211 aa11.04□□□□□ -0.64
APTX-209ENST00000460940 AGTP01019 485 aa11.04□□□□□ -0.64
APTX-209ENST00000460940 HOXC4P09017 264 aaPredicted RBP11.04□□□□□ -0.64
APTX-209ENST00000460940 CHRNA4P43681 627 aa11.04□□□□□ -0.64
APTX-209ENST00000460940 RXRGP48443 463 aa11.04□□□□□ -0.64
APTX-209ENST00000460940 SPINT3P49223 89 aa11.04□□□□□ -0.64
APTX-209ENST00000460940 ATP1A2P50993 1020 aa11.04□□□□□ -0.64
APTX-209ENST00000460940 THOP1P52888 689 aa11.04□□□□□ -0.64
APTX-209ENST00000460940 KIAA1024LP59773 190 aa11.04□□□□□ -0.64
APTX-209ENST00000460940 DCDC1P59894 354 aa11.04□□□□□ -0.64
APTX-209ENST00000460940 ELF3P78545 371 aaPredicted RBP11.04□□□□□ -0.64
APTX-209ENST00000460940 GUCY1A3Q02108 690 aa11.04□□□□□ -0.64
APTX-209ENST00000460940 SEMA5AQ13591 1074 aa11.04□□□□□ -0.64
APTX-209ENST00000460940 PTPRRQ15256 657 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms