RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 VPS16Q9H269 839 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 APOBEC3GQ9HC16 384 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 UBN1Q9NPG3 1134 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 ENTPD7Q9NQZ7 604 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 TBC1D23Q9NUY8 699 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 TMLHEQ9NVH6 421 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 GRHPRQ9UBQ7 328 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 HMGXB4Q9UGU5 601 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 CIDEBQ9UHD4 219 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 RWDD2AQ9UIY3 292 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 GGA2Q9UJY4 613 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 RALYQ9UKM9 306 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 ADAM28Q9UKQ2 775 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 CORO1CQ9ULV4 474 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 PYCARDQ9ULZ3 195 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 UBQLN1Q9UMX0 589 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 SLC45A2Q9UMX9 530 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 NFE2L3Q9Y4A8 694 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 PLEKHM1Q9Y4G2 1056 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 TSC2P49815 1807 aa4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 ASH1LQ9NR48 2969 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-203ENST00000460928 GCN1Q92616 2671 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 CCDC151A5D8V7 595 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 MBD3L4A6NDZ8 208 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 MBD3L3A6NE82 208 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 CLCA1A8K7I4 914 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 TMEM233B4DJY2 109 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 KCNJ18B7U540 433 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 C5orf67F2Z3F1 127 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 H3BQ06 376 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 EBAG9O00559 213 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 CYB561D2O14569 222 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 MAP2K7O14733 419 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 TRIM24O15164 1050 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 TEX28O15482 410 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 PJA2O43164 708 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 AP5Z1O43299 807 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 MTRF1O75570 445 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 RFPL2O75678 378 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 DNAJB5O75953 348 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 UNC5CO95185 931 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 LUC7L3O95232 432 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 SEC24AO95486 1093 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 GLP2RO95838 553 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 TNNC2P02585 160 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 PYGLP06737 847 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 CNPP09543 421 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 EPB41P11171 864 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 KRT13P13646 458 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 ALADP13716 330 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 CD58P19256 250 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 TRIM21P19474 475 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 LRPAP1P30533 357 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 SLC6A4P31645 630 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 OR1D2P34982 312 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 MTIF2P46199 727 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 SLC11A2P49281 568 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 ITGA8P53708 1063 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 CLRN1P58418 232 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 POU6F2P78424 691 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 POU5F1Q01860 360 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 LRRC63Q05C16 580 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 STIM1Q13586 685 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 CUL3Q13618 768 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 KCNJ12Q14500 433 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 SPARCL1Q14515 664 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 KRT31Q15323 416 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 CNGA3Q16281 694 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 ST3GAL2Q16842 350 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 TPD52L1Q16890 204 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 SOWAHAQ2M3V2 549 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 LY6G5CQ5SRR4 150 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 DCAF12L1Q5VU92 463 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 SDHAF4Q5VUM1 108 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 DPY19L2P1Q6NXN4 242 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 DSTYKQ6XUX3 929 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 C15orf39Q6ZRI6 1047 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 RRAGAQ7L523 313 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 USP37Q86T82 979 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 WDR49Q8IV35 697 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 ARHGEF19Q8IW93 802 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 PEX5LQ8IYB4 626 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 GALNT15Q8N3T1 639 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 PRSS33Q8NF86 280 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 OR10T2Q8NGX3 314 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 OR56A3Q8NH54 315 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 LNX1Q8TBB1 728 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 SLC22A17Q8WUG5 538 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 IPCEF1Q8WWN9 437 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 PPP2R3CQ969Q6 453 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 HPDLQ96IR7 371 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 ANKRD36BP1Q96IX9 119 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 RBM41Q96IZ5 413 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 PGLYRP2Q96PD5 576 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 KLHL5Q96PQ7 755 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 TWNKQ96RR1 684 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 SH3GL1Q99961 368 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 CLSTN3Q9BQT9 956 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 TMEM175Q9BSA9 504 aa4.94□□□□□ -1.62
ATPAF1-203ENST00000460928 HERC2P3Q9BVR0 1158 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms