RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 HOXA11P31270 313 aaPredicted RBP3.41□□□□□ -1.86
RFC4-211ENST00000460408 NANOS2P60321 138 aaKnown RBP3.41□□□□□ -1.86
RFC4-211ENST00000460408 TFAP4Q01664 338 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 IKQ13123 557 aaPredicted RBP3.41□□□□□ -1.86
RFC4-211ENST00000460408 NAB2Q15742 525 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 SETMARQ53H47 684 aaPredicted RBP3.41□□□□□ -1.86
RFC4-211ENST00000460408 TDRD12Q587J7 1177 aaKnown RBP3.41□□□□□ -1.86
RFC4-211ENST00000460408 PAPPA-AS1Q5QFB9 102 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 FRG2Q64ET8 278 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 SIGIRRQ6IA17 410 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 TYW3Q6IPR3 259 aaKnown RBP3.41□□□□□ -1.86
RFC4-211ENST00000460408 CACNA2D4Q7Z3S7 1137 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 NRROSQ86YC3 692 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 CHERPQ8IWX8 916 aaKnown RBP3.41□□□□□ -1.86
RFC4-211ENST00000460408 BEST3Q8N1M1 668 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 RND1Q92730 232 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 MIB2Q96AX9 1013 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 CALML4Q96GE6 196 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 GRAMD2BQ96HH9 432 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 CCDC34Q96HJ3 373 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 TXNDC15Q96J42 360 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 FEM1CQ96JP0 617 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 LYZL4Q96KX0 146 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 HARBI1Q96MB7 349 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 NCAPGQ9BPX3 1015 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 CENPOQ9BU64 300 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 MMTAG2Q9BU76 263 aaKnown RBP3.41□□□□□ -1.86
RFC4-211ENST00000460408 C17orf75Q9HAS0 396 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 ANKEF1Q9NU02 776 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 ACSS1Q9NUB1 689 aaPredicted RBP3.41□□□□□ -1.86
RFC4-211ENST00000460408 NENFQ9UMX5 172 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 PCDHA7Q9UN72 937 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 TMEM5Q9Y2B1 443 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 PAM16Q9Y3D7 125 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 PASKQ96RG2 1323 aa3.41□□□□□ -1.86
RFC4-211ENST00000460408 IGLV5-52A0A0A0MRZ9 124 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 OR2A25A4D2G3 310 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 PAPSS1O43252 624 aaPredicted RBP3.4□□□□□ -1.87
RFC4-211ENST00000460408 FIBPO43427 364 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 TMCC2O75069 709 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 ENTPD3O75355 529 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 ERAL1O75616 437 aaKnown RBP3.4□□□□□ -1.87
RFC4-211ENST00000460408 NR2F1P10589 423 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 ACTN1P12814 892 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 SELLP14151 372 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 ANXA7P20073 488 aaKnown RBP3.4□□□□□ -1.87
RFC4-211ENST00000460408 UBA1P22314 1058 aaKnown RBP3.4□□□□□ -1.87
RFC4-211ENST00000460408 ITGB8P26012 769 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 C21orf33P30042 268 aaPredicted RBP3.4□□□□□ -1.87
RFC4-211ENST00000460408 SLC15A1P46059 708 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 SMARCA2P51531 1590 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 HNRNPH2P55795 449 aaKnown RBP3.4□□□□□ -1.87
RFC4-211ENST00000460408 SNX16P57768 344 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 BRWD1-AS2P59051 145 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 CRYZQ08257 329 aaKnown RBP3.4□□□□□ -1.87
RFC4-211ENST00000460408 SPOCK1Q08629 439 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 STK4Q13043 487 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 BECN1Q14457 450 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 PCLAFQ15004 111 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 PNLIPRP3Q17RR3 467 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 ZSCAN23Q3MJ62 389 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 AMZ1Q400G9 498 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 ZNF805Q5CZA5 627 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 EFHC1Q5JVL4 640 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 RARS2Q5T160 578 aaKnown RBP3.4□□□□□ -1.87
RFC4-211ENST00000460408 TMEM198Q66K66 360 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 LCN10Q6JVE6 187 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 ZNF280DQ6N043 979 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 ZNF549Q6P9A3 640 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 TEX11Q8IYF3 940 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 CLIP4Q8N3C7 705 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 C17orf53Q8N3J3 647 aaPredicted RBP3.4□□□□□ -1.87
RFC4-211ENST00000460408 RBMXL3Q8N7X1 1067 aaKnown RBP3.4□□□□□ -1.87
RFC4-211ENST00000460408 CCDC89Q8N998 374 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 IL17RCQ8NAC3 791 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 OR2AK2Q8NG84 335 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 OR14A16Q8NHC5 309 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 B4GALNT2Q8NHY0 566 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 WFIKKN2Q8TEU8 576 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 FAM216AQ8WUB2 273 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 RHBDF1Q96CC6 855 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 MXD3Q9BW11 206 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 SF3B5Q9BWJ5 86 aaKnown RBP3.4□□□□□ -1.87
RFC4-211ENST00000460408 MAK16Q9BXY0 300 aaKnown RBP3.4□□□□□ -1.87
RFC4-211ENST00000460408 PIGMQ9H3S5 423 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 MAGIXQ9H6Y5 334 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 MRPL44Q9H9J2 332 aaKnown RBP3.4□□□□□ -1.87
RFC4-211ENST00000460408 SEBOXQ9HB31 216 aaPredicted RBP3.4□□□□□ -1.87
RFC4-211ENST00000460408 NOX4Q9NPH5 578 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 HIF1ANQ9NWT6 349 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 COPG2Q9UBF2 871 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 UBA2Q9UBT2 640 aaPredicted RBP3.4□□□□□ -1.87
RFC4-211ENST00000460408 SEC63Q9UGP8 760 aaKnown RBP3.4□□□□□ -1.87
RFC4-211ENST00000460408 NRBP1Q9UHY1 535 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 FBXW11Q9UKB1 542 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 PADI1Q9ULC6 663 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 TTC7AQ9ULT0 858 aaPredicted RBP3.4□□□□□ -1.87
RFC4-211ENST00000460408 MYO6Q9UM54 1294 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 CMAHPQ9Y471 501 aa3.4□□□□□ -1.87
RFC4-211ENST00000460408 MYO15BQ96JP2 1530 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms