RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ZNF23P17027 643 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 ZNF26P17031 533 aaPredicted RBP8.81□□□□□ -1
HDAC3-202ENST00000459727 LPOP22079 712 aaPredicted RBP8.81□□□□□ -1
HDAC3-202ENST00000459727 FGFR3P22607 806 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 FASP25445 335 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 ATP5C1P36542 298 aaKnown RBP8.81□□□□□ -1
HDAC3-202ENST00000459727 DPP6P42658 865 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 PTGER3P43115 390 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 MAPK8P45983 427 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 ARSDP51689 593 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 SLC7A2P52569 658 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 IL2P60568 153 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 MAXP61244 160 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 ESRRGP62508 458 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 CLCQ05315 142 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 TAF10Q12962 218 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 RCAN2Q14206 197 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 UGT3A2Q3SY77 523 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 PDCD4Q53EL6 469 aaKnown RBP8.81□□□□□ -1
HDAC3-202ENST00000459727 TMTC4Q5T4D3 741 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 THEMIS2Q5TEJ8 643 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 LYPLAL1Q5VWZ2 237 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 CCSAPQ6IQ19 270 aaPredicted RBP8.81□□□□□ -1
HDAC3-202ENST00000459727 TTC23LQ6PF05 361 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 RNF165Q6ZSG1 346 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 KDELC2Q7Z4H8 507 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 GLT6D1Q7Z4J2 308 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 METTL3Q86U44 580 aaKnown RBP8.81□□□□□ -1
HDAC3-202ENST00000459727 CARM1Q86X55 608 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 PROSER1Q86XN7 944 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 CHERPQ8IWX8 916 aaKnown RBP8.81□□□□□ -1
HDAC3-202ENST00000459727 DDIASQ8IXT1 998 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 TBC1D21Q8IYX1 336 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 SPATA6LQ8N4H0 392 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 CARNMT1Q8N4J0 409 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 PCDH20Q8N6Y1 951 aaKnown RBP8.81□□□□□ -1
HDAC3-202ENST00000459727 OSCP1Q8WVF1 389 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 ANKRD49Q8WVL7 239 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 TRIB2Q92519 343 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 KCNJ9Q92806 393 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 TUBGCP3Q96CW5 907 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 CDKN2AIPNLQ96HQ2 116 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 MARK4Q96L34 752 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 CNBD2Q96M20 576 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 TBATAQ96M53 351 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 GLT1D1Q96MS3 346 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 KLHL5Q96PQ7 755 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 TRIB3Q96RU7 358 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 ZNF382Q96SR6 550 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 YTHDF1Q9BYJ9 559 aaKnown RBP8.81□□□□□ -1
HDAC3-202ENST00000459727 BRINP2Q9C0B6 783 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 NACA2Q9H009 215 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 CWH43Q9H720 699 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 AKTIPQ9H8T0 292 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 SCUBE2Q9NQ36 999 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 NUDT4Q9NZJ9 180 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 TRMT6Q9UJA5 497 aaKnown RBP8.81□□□□□ -1
HDAC3-202ENST00000459727 CNOT6Q9ULM6 557 aaKnown RBP8.81□□□□□ -1
HDAC3-202ENST00000459727 SLC8A2Q9UPR5 921 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 DNAJC15Q9Y5T4 150 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 SNX13Q9Y5W8 968 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 MYO16Q9Y6X6 1858 aa8.81□□□□□ -1
HDAC3-202ENST00000459727 MYO18AQ92614 2054 aaKnown RBP8.81□□□□□ -1
HDAC3-202ENST00000459727 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.8□□□□□ -1
HDAC3-202ENST00000459727 FAM234BA2RU67 622 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 MTMR11A4FU01 709 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 UBFD1O14562 309 aaKnown RBP8.8□□□□□ -1
HDAC3-202ENST00000459727 PIP5K1BO14986 540 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 INSIG1O15503 277 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 SNAP91O60641 907 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 CLASP2O75122 1294 aaKnown RBP8.8□□□□□ -1
HDAC3-202ENST00000459727 TULP3O75386 442 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 GMNNO75496 209 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 EEDO75530 441 aaKnown RBP8.8□□□□□ -1
HDAC3-202ENST00000459727 RNASEH2AO75792 299 aaKnown RBP8.8□□□□□ -1
HDAC3-202ENST00000459727 CNTN5O94779 1100 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 TMCC1O94876 653 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 SLC4A1P02730 911 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 CYBBP04839 570 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 ITGB1P05556 798 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 PRR35P0CG20 571 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 CKBP12277 381 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 PKMP14618 531 aaKnown RBP8.8□□□□□ -1
HDAC3-202ENST00000459727 TCN1P20061 433 aaPredicted RBP8.8□□□□□ -1
HDAC3-202ENST00000459727 MSH3P20585 1137 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 KCNA5P22460 613 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 EEF1DP29692 281 aaKnown RBP8.8□□□□□ -1
HDAC3-202ENST00000459727 PIK3CGP48736 1102 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 PLK1P53350 603 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 NME5P56597 212 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 ERVK-8P63133 956 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 MAD2L1Q13257 205 aaPredicted RBP8.8□□□□□ -1
HDAC3-202ENST00000459727 CRHR2Q13324 411 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 ZNF177Q13360 481 aaPredicted RBP8.8□□□□□ -1
HDAC3-202ENST00000459727 DDR2Q16832 855 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 PFKFB4Q16877 469 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 SLC5A9Q2M3M2 681 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 ZNF789Q5FWF6 425 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 C6orf10Q5SRN2 563 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 FAM171A1Q5VUB5 890 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms