RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 VIPP01282 170 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 POU2F2P09086 479 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 VIL1P09327 827 aaKnown RBP-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 CTAGE8P0CG41 777 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 ODC1P11926 461 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 LIFP15018 202 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 ZNF44P15621 663 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 PRKACGP22612 351 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 NR2F2P24468 414 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 PIK3CBP42338 1070 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 CDKN1CP49918 316 aaPredicted RBP-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 B3GALT5-AS1P59052 145 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 ABCE1P61221 599 aaKnown RBP-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 KRT85P78386 507 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 RNASELQ05823 741 aaKnown RBP-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 RBL2Q08999 1139 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 GALNT2Q10471 571 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 KCTD19Q17RG1 926 aaPredicted RBP-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 KRT24Q2M2I5 525 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 SYCP2LQ5T4T6 812 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 TMCO4Q5TGY1 634 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 AGBL2Q5U5Z8 902 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 CES5AQ6NT32 575 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 AADACL2Q6P093 401 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 B3GNT6Q6ZMB0 384 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 ZNF704Q6ZNC4 412 aaPredicted RBP-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 UNC13DQ70J99 1090 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 CHMP1BQ7LBR1 199 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 HAUS6Q7Z4H7 955 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 TRIM74Q86UV6 250 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 TRIM73Q86UV7 250 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 MON1AQ86VX9 555 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 HOGA1Q86XE5 327 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 CALHM3Q86XJ0 350 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 CTAGE4Q8IX94 777 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 VPS52Q8N1B4 723 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 NGEFQ8N5V2 710 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 KLHDC1Q8N7A1 406 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 TPRX1Q8N7U7 411 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 MCPH1Q8NEM0 835 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 NUP37Q8NFH4 326 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 PLBD2Q8NHP8 589 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 TDRD7Q8NHU6 1098 aaKnown RBP-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 U2AF1L4Q8WU68 220 aaKnown RBP-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 CHPT1Q8WUD6 406 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 SLC22A17Q8WUG5 538 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 RND1Q92730 232 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 NMD3Q96D46 503 aaKnown RBP-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 MVB12AQ96EY5 273 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 CALML4Q96GE6 196 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 MPP4Q96JB8 637 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 PRMT6Q96LA8 375 aaPredicted RBP-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 QRFPRQ96P65 431 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 MAPKAP1Q9BPZ7 522 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 CAAP1Q9H8G2 361 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 GPN1Q9HCN4 374 aaPredicted RBP-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 WDR6Q9NNW5 1121 aaKnown RBP-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 MMP25Q9NPA2 562 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 NMRK2Q9NPI5 230 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 PANK4Q9NVE7 773 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 MARCH4Q9P2E8 410 aaPredicted RBP-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 PRODH2Q9UF12 536 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 GRID1Q9ULK0 1009 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 PPP1R3CQ9UQK1 317 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 TNNQ9UQP3 1299 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 WDR37Q9Y2I8 494 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 KLHL20Q9Y2M5 609 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 RABGAP1Q9Y3P9 1069 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 SAMHD1Q9Y3Z3 626 aaKnown RBP-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 UBIAD1Q9Y5Z9 338 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 COPG1Q9Y678 874 aaKnown RBP-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 STYXL1Q9Y6J8 313 aa-0.04□□□□□ -2.42
SNORD42B-201ENST00000458893 PNMA6EA0A0J9YXQ4 647 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 TRIM49D1C9J1S8 452 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 PHGR1C9JFL3 82 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 SLC25A17O43808 307 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 SLC24A1O60721 1099 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 SH3BGRLO75368 114 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 CDC45O75419 566 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 LRCH4O75427 683 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 SKAP2O75563 359 aaPredicted RBP-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 APBB3O95704 486 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 CYP3A4P08684 503 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 SRGAP2BP0DMP2 458 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 IDEP14735 1019 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 CD1EP15812 388 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 CTPS1P17812 591 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 IBSPP21815 317 aaPredicted RBP-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 PCP4P48539 62 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 EVA1CP58658 441 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 RPS16P62249 146 aaKnown RBP-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 CYCSP99999 105 aaKnown RBP-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 CDR2Q01850 454 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 MBTD1Q05BQ5 628 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 CD300CQ08708 224 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 ALKBH1Q13686 389 aaKnown RBP-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 ATP1A4Q13733 1029 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 LY6DQ14210 128 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 PTK2BQ14289 1009 aa-0.05□□□□□ -2.42
SNORD42B-201ENST00000458893 TTF1Q15361 905 aaPredicted RBP-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms