RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 ZNF670Q9BS34 389 aa15.19■□□□□ 0.02
CROCCP4-201ENST00000457096 SPTLC3Q9NUV7 552 aa15.19■□□□□ 0.02
CROCCP4-201ENST00000457096 TRNAU1APQ9NX07 287 aaKnown RBP15.19■□□□□ 0.02
CROCCP4-201ENST00000457096 HYOU1Q9Y4L1 999 aa15.19■□□□□ 0.02
CROCCP4-201ENST00000457096 CFAP46Q8IYW2 2715 aa15.19■□□□□ 0.02
CROCCP4-201ENST00000457096 SCN8AQ9UQD0 1980 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 IGHV5-10-1A0A0J9YXX1 117 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 CAPN8A6NHC0 703 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 FADS2P1A8MWK0 482 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 ASMTLO95671 621 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 H2AFZP0C0S5 128 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 PIRTP0C851 137 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 KDELR1P24390 212 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 CCNCP24863 283 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 ARSDP51689 593 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 EIF3IQ13347 325 aaKnown RBP15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 GALNT3Q14435 633 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 QPCTQ16769 361 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 PYCR3Q53H96 274 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 ALG1LQ6GMV1 187 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 ADAMTSL4Q6UY14 1074 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 H2AFVQ71UI9 128 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 ZNF438Q7Z4V0 828 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 PIM3Q86V86 326 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 SNRNP27Q8WVK2 155 aaKnown RBP15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 CTNNBL1Q8WYA6 563 aaPredicted RBP15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 EID2BQ96D98 161 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 RNF31Q96EP0 1072 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 CCDC97Q96F63 343 aaPredicted RBP15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 TSGA13Q96PP4 275 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 PCDH9Q9HC56 1237 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 CNOT6Q9ULM6 557 aaKnown RBP15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 PCDHGA7Q9Y5G6 932 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 HEY1Q9Y5J3 304 aa15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 ARHGEF17Q96PE2 2063 aaPredicted RBP15.18■□□□□ 0.02
CROCCP4-201ENST00000457096 C1orf232A0A0U1RR37 186 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 LRRD1A4D1F6 860 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 TMX2-CTNND1H3BSU7 103 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 CPNE6O95741 557 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 SLC4A1P02730 911 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 TNNT1P13805 278 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 TEAD1P28347 426 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 HNRNPH3P31942 346 aaKnown RBP15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 CYP4F2P78329 520 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 BIRC2Q13490 618 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 PDK2Q15119 407 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 LLGL1Q15334 1064 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 SLC18A3Q16572 532 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 TIGD7Q6NT04 549 aaPredicted RBP15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 ZNF605Q86T29 641 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 LRRC49Q8IUZ0 686 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 CCDC13Q8IYE1 715 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 PLD5Q8N7P1 536 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 SLC37A2Q8TED4 501 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 SCARF2Q96GP6 870 aaPredicted RBP15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 COX14Q96I36 57 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 RNF157Q96PX1 679 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 SEPT10Q9P0V9 454 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 ZNHIT2Q9UHR6 403 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 KCNK6Q9Y257 313 aa15.17■□□□□ 0.02
CROCCP4-201ENST00000457096 UNC13CQ8NB66 2214 aa15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 IGHV1OR21-1A0A087WYE8 117 aa15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 C3orf70A6NLC5 250 aaPredicted RBP15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 NVLO15381 856 aaKnown RBP15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 DNAJC6O75061 913 aa15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 FGF3P11487 239 aaPredicted RBP15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 NFKBIAP25963 317 aa15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 MLLT3P42568 568 aaPredicted RBP15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 DYNLT1P63172 113 aa15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 NR1D2Q14995 579 aa15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 ALS2CLQ60I27 953 aa15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 CHST15Q7LFX5 561 aaPredicted RBP15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 LYSMD3Q7Z3D4 306 aa15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 GALNT13Q8IUC8 556 aa15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 EXD3Q8N9H8 876 aa15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 LSM14AQ8ND56 463 aaKnown RBP15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 SLC35G2Q8TBE7 412 aa15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 HDAC11Q96DB2 347 aa15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 CMKLR1Q99788 373 aa15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 CDH19Q9H159 772 aa15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 KCTD5Q9NXV2 234 aa15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 UVRAGQ9P2Y5 699 aa15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 SHOC2Q9UQ13 582 aa15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.16■□□□□ 0.02
CROCCP4-201ENST00000457096 A8MU76 341 aa15.15■□□□□ 0.02
CROCCP4-201ENST00000457096 KRT7P08729 469 aa15.15■□□□□ 0.02
CROCCP4-201ENST00000457096 TMEM253P0C7T8 217 aa15.15■□□□□ 0.02
CROCCP4-201ENST00000457096 LIPCP11150 499 aa15.15■□□□□ 0.02
CROCCP4-201ENST00000457096 ZNF30P17039 623 aa15.15■□□□□ 0.02
CROCCP4-201ENST00000457096 NOP2P46087 812 aaKnown RBP15.15■□□□□ 0.02
CROCCP4-201ENST00000457096 SPINT3P49223 89 aa15.15■□□□□ 0.02
CROCCP4-201ENST00000457096 PPM1FP49593 454 aaPredicted RBP15.15■□□□□ 0.02
CROCCP4-201ENST00000457096 AP1B1Q10567 949 aa15.15■□□□□ 0.02
CROCCP4-201ENST00000457096 NFATC2Q13469 925 aa15.15■□□□□ 0.02
CROCCP4-201ENST00000457096 PCSK7Q16549 785 aa15.15■□□□□ 0.02
CROCCP4-201ENST00000457096 SNAP47Q5SQN1 464 aa15.15■□□□□ 0.02
CROCCP4-201ENST00000457096 ZNF765Q7L2R6 523 aa15.15■□□□□ 0.02
CROCCP4-201ENST00000457096 MAP7D3Q8IWC1 876 aa15.15■□□□□ 0.02
CROCCP4-201ENST00000457096 NDUFAF2Q8N183 169 aa15.15■□□□□ 0.02
CROCCP4-201ENST00000457096 EXD1Q8NHP7 514 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms