RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 RPN1P04843 607 aaKnown RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 SRPRAP08240 638 aaKnown RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 TBC1D3HP0C7X1 549 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 THEGLP0DJG4 465 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 ALPPL2P10696 532 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 IDEP14735 1019 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 POLR2EP19388 210 aaKnown RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 WT1P19544 449 aaPredicted RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 ADORA2BP29275 332 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 IGFALSP35858 605 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 CASRP41180 1078 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 CSKP41240 450 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 MAN2A2P49641 1150 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 CASP4P49662 377 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 METAP1P53582 386 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 AP3M2P53677 418 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 TAS2R38P59533 333 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 YWHAGP61981 247 aaKnown RBP eCLIP3.78□□□□□ -1.8
RBM39-220ENST00000455343 SNRPFP62306 86 aaKnown RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 SLC25A3Q00325 362 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 EIF3IQ13347 325 aaKnown RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 ZNF177Q13360 481 aaPredicted RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 ELAVL3Q14576 367 aaKnown RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 CLCA4Q14CN2 919 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 TGIF1Q15583 401 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 ELAVL1Q15717 326 aaKnown RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 IGFBP7Q16270 282 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 SGSM1Q2NKQ1 1148 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 ZNF699Q32M78 642 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 KRTAP15-1Q3LI76 137 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 ZSCAN23Q3MJ62 389 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 ZACNQ401N2 412 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 GAGE13Q4V321 117 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 FAM133BQ5BKY9 247 aaKnown RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 PRAMEF9Q5VWM5 478 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 TBC1D3GQ6DHY5 549 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 TBC1D3CQ6IPX1 549 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 FAM111BQ6SJ93 734 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 Q6ZPA2 131 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 ABI3BPQ7Z7G0 1075 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 MRGPRGQ86SM5 289 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 C14orf80Q86SX3 495 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 TBC1D3Q8IZP1 549 aaPredicted RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 SLC22A18ASQ8N1D0 253 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 ARHGAP18Q8N392 663 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 ZNF557Q8N988 423 aaPredicted RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 XXYLT1Q8NBI6 393 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 ZNF564Q8TBZ8 553 aaPredicted RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 IFI44Q8TCB0 444 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 MAPK15Q8TD08 544 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 GANCQ8TET4 914 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 NOC3LQ8WTT2 800 aaKnown RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 TMEM174Q8WUU8 243 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 TAF4BQ92750 862 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 AZIN2Q96A70 460 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 C16orf92Q96LL3 132 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 ZSCAN31Q96LW9 406 aaPredicted RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 OMDQ99983 421 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 OSBPL2Q9H1P3 480 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 ADNPQ9H2P0 1102 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 PANK4Q9NVE7 773 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 SAMD15Q9P1V8 674 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 SLCO3A1Q9UIG8 710 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 TUBD1Q9UJT1 453 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 ERVW-1Q9UQF0 538 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 CA5BQ9Y2D0 317 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 HBS1LQ9Y450 684 aaKnown RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 CSNK1G3Q9Y6M4 447 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 LRBAP50851 2863 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 ABCA12Q86UK0 2595 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 CKAP5Q14008 2032 aa3.78□□□□□ -1.8
RBM39-220ENST00000455343 ZNF638Q14966 1978 aaKnown RBP3.78□□□□□ -1.8
RBM39-220ENST00000455343 ZFHX3Q15911 3703 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 CELSR2Q9HCU4 2923 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 DNHD1Q96M86 4753 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 A0A087X0B3 334 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 CCDC187A0A096LP49 1063 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 EDDM13A0A1B0GTR0 161 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 UBE2QL1A1L167 161 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 LRRIQ3A6PVS8 624 aaPredicted RBP3.77□□□□□ -1.81
RBM39-220ENST00000455343 IKBKBO14920 756 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 MCF2LO15068 1137 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 CLIC2O15247 247 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 NVLO15381 856 aaKnown RBP3.77□□□□□ -1.81
RBM39-220ENST00000455343 FFAR2O15552 330 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 RTN2O75298 545 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 NEBLO76041 1014 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 CSF2P04141 144 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 VSIG10L2P0DP72 767 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 LIPCP11150 499 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 P4HA1P13674 534 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 KRT4P19013 534 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 POU3F2P20265 443 aaPredicted RBP3.77□□□□□ -1.81
RBM39-220ENST00000455343 MAT2AP31153 395 aaKnown RBP3.77□□□□□ -1.81
RBM39-220ENST00000455343 SLC5A2P31639 672 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 SLC6A4P31645 630 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 PSMD8P48556 350 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 NANOS3P60323 173 aaKnown RBP3.77□□□□□ -1.81
RBM39-220ENST00000455343 ST8SIA6P61647 398 aa3.77□□□□□ -1.81
RBM39-220ENST00000455343 HNRNPKP61978 463 aaKnown RBP eCLIP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms