RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 NPAS4Q8IUM7 802 aa11.94□□□□□ -0.5
SMPD4-213ENST00000454468 LRRC49Q8IUZ0 686 aa11.94□□□□□ -0.5
SMPD4-213ENST00000454468 PQLC1Q8N2U9 271 aa11.94□□□□□ -0.5
SMPD4-213ENST00000454468 MIER2Q8N344 545 aa11.94□□□□□ -0.5
SMPD4-213ENST00000454468 GRIN3AQ8TCU5 1115 aa11.94□□□□□ -0.5
SMPD4-213ENST00000454468 TWIST2Q8WVJ9 160 aa11.94□□□□□ -0.5
SMPD4-213ENST00000454468 MYLIPQ8WY64 445 aa11.94□□□□□ -0.5
SMPD4-213ENST00000454468 YME1L1Q96TA2 773 aa11.94□□□□□ -0.5
SMPD4-213ENST00000454468 CIB1Q99828 191 aa11.94□□□□□ -0.5
SMPD4-213ENST00000454468 C1QTNF1Q9BXJ1 281 aa11.94□□□□□ -0.5
SMPD4-213ENST00000454468 ASB8Q9H765 288 aa11.94□□□□□ -0.5
SMPD4-213ENST00000454468 SYTL2Q9HCH5 934 aa11.94□□□□□ -0.5
SMPD4-213ENST00000454468 ZFP14Q9HCL3 533 aa11.94□□□□□ -0.5
SMPD4-213ENST00000454468 IGSF5Q9NSI5 407 aa11.94□□□□□ -0.5
SMPD4-213ENST00000454468 EIF2B4Q9UI10 523 aaKnown RBP11.94□□□□□ -0.5
SMPD4-213ENST00000454468 A0A0J9YYE9 177 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 SYNCRIPO60506 623 aaKnown RBP11.93□□□□□ -0.5
SMPD4-213ENST00000454468 URODP06132 367 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 LYNP07948 512 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 GABRR2P28476 465 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 NRG1Q02297 640 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-213ENST00000454468 DDX39BQ13838 428 aaKnown RBP11.93□□□□□ -0.5
SMPD4-213ENST00000454468 ACAP2Q15057 778 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 OR4D1Q15615 310 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 IMPG1Q17R60 797 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 PLA2G4EQ3MJ16 856 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 TECRLQ5HYJ1 363 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 PSAPL1Q6NUJ1 521 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 CLEC14AQ86T13 490 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 CACUL1Q86Y37 369 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 PCYOX1LQ8NBM8 494 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 STAG3L4Q8TBR4 150 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 PPP2R3CQ969Q6 453 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 CLPBQ9H078 707 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.93□□□□□ -0.51e-6■■■■■ 32
SMPD4-213ENST00000454468 RNF38Q9H0F5 515 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 UNC93B1Q9H1C4 597 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 AKTIPQ9H8T0 292 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 THEGQ9P2T0 379 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 RPL26L1Q9UNX3 145 aaKnown RBP11.93□□□□□ -0.5
SMPD4-213ENST00000454468 CNPP09543 421 aaKnown RBP11.93□□□□□ -0.5
SMPD4-213ENST00000454468 ATF6P18850 670 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 GDF5P43026 501 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 DIO3P55073 304 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 KCNK10P57789 538 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 IL2P60568 153 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 GRB7Q14451 532 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 C18orf21Q32NC0 220 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-213ENST00000454468 METTL21CQ5VZV1 264 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 IL27RAQ6UWB1 636 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 TMEM207Q6UWW9 146 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 TRIML2Q8N7C3 387 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 NAT16Q8N8M0 369 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 CLHC1Q8NHS4 586 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 EEF1AKMT1Q8WVE0 214 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 JADE3Q92613 823 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 EFHD1Q9BUP0 239 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 NOL11Q9H8H0 719 aaKnown RBP11.93□□□□□ -0.5
SMPD4-213ENST00000454468 TREX1Q9NSU2 369 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 A0A1W2PQ67 120 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 ZNF195O14628 629 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 TMCC1O94876 653 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 NCK1P16333 377 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 VCLP18206 1134 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 ADRA1AP35348 466 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 YBEYP58557 167 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-213ENST00000454468 IHHQ14623 411 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 ZNF697Q5TEC3 545 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 BNIPLQ7Z465 357 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 CLYBLQ8N0X4 340 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 ARRDC2Q8TBH0 407 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 LRTOMTQ8WZ04 291 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 WBP2Q969T9 261 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 C3orf30Q96M34 536 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 RMI1Q9H9A7 625 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 CPQQ9Y646 472 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 TET1Q8NFU7 2136 aa11.93□□□□□ -0.5
SMPD4-213ENST00000454468 LDB2O43679 373 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 NRP2O60462 931 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 PRAMEF11O60813 436 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 OR4F21O95013 312 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 CKMT2P17540 419 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 PRDX3P30048 256 aaKnown RBP11.92□□□□□ -0.5
SMPD4-213ENST00000454468 SH3BP2P78314 561 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 DSC1Q08554 894 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 PDK3Q15120 406 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 IL23RQ5VWK5 629 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 REP15Q6BDI9 236 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 KIAA0408Q6ZU52 694 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 ISCA2Q86U28 154 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 SPPL2CQ8IUH8 684 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 PIANPQ8IYJ0 282 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 MYO1HQ8N1T3 1032 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 CYGBQ8WWM9 190 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 SLC22A12Q96S37 553 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 CORO1BQ9BR76 489 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 ZBTB26Q9HCK0 441 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 TMEM39AQ9NV64 488 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 WWOXQ9NZC7 414 aa11.92□□□□□ -0.5
SMPD4-213ENST00000454468 CD84Q9UIB8 345 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms