RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 CWC15Q9P013 229 aaKnown RBP5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 RCOR3Q9P2K3 495 aaPredicted RBP5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TBC1D29Q9UFV1 150 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SEPT3Q9UH03 358 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PILRAQ9UKJ1 303 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MED13Q9UHV7 2174 aa5.96□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FADS2P1A8MWK0 482 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DDX3YO15523 660 aaKnown RBP5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 HTRA2O43464 458 aaPredicted RBP5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ANKRD17O75179 2603 aaKnown RBP5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 LRCH4O75427 683 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TIAF1O95411 115 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ASMTLO95671 621 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NTRK1P04629 796 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 IVLP07476 585 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CD48P09326 243 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PIRTP0C851 137 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ATXN8OSP0DMR3 200 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 GP1BBP13224 206 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ATP1A3P13637 1013 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TYRP1P17643 537 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 AMPD1P23109 780 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ERCC5P28715 1186 aaPredicted RBP5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 STAT5AP42229 794 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 LEPRP48357 1165 aaKnown RBP5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SEPHS1P49903 392 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 RPS18P62269 152 aaKnown RBP5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 HHEXQ03014 270 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FOXM1Q08050 763 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 IL10RBQ08334 325 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MMRN1Q13201 1228 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 GRM3Q14832 879 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TSR1Q2NL82 804 aaKnown RBP5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FKBP15Q5T1M5 1219 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DCAF12Q5T6F0 453 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 FAM69BQ5VUD6 431 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ALS2CLQ60I27 953 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 USP45Q70EL2 814 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CHST15Q7LFX5 561 aaPredicted RBP5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 GALNT13Q8IUC8 556 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NLGN4XQ8N0W4 816 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SFRP1Q8N474 314 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TTC30BQ8N4P2 665 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 GALNT6Q8NCL4 622 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CCDC112Q8NEF3 446 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 LPCAT1Q8NF37 534 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NLGN4YQ8NFZ3 816 aaPredicted RBP5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NCSTNQ92542 709 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 RSC1A1Q92681 617 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PCSK5Q92824 1860 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 KIAA1143Q96AT1 154 aaPredicted RBP5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 AP2M1Q96CW1 435 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 AHCYL2Q96HN2 611 aaKnown RBP5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SLC45A3Q96JT2 553 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MCCC1Q96RQ3 725 aaPredicted RBP5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SEMA3CQ99985 751 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MGME1Q9BQP7 344 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SYT11Q9BT88 431 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 RIOK2Q9BVS4 552 aaKnown RBP5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ULBP3Q9BZM4 244 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SPRY4Q9C004 299 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ADNPQ9H2P0 1102 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 OSGEPL1Q9H4B0 414 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TRNAU1APQ9NX07 287 aaKnown RBP5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DTLQ9NZJ0 730 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MYO1AQ9UBC5 1043 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CROTQ9UKG9 612 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PCDHGA3Q9Y5H0 932 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SPTBP11277 2137 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ESPL1Q14674 2120 aa5.95□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CDC14CA4D256 554 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 A6NCN8 305 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 LRRC53A6NM62 1247 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 B4E171 279 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 GPR39O43194 453 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 KIF1CO43896 1103 aaKnown RBP5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PRPSAP2O60256 369 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MAFKO60675 156 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 SOCS5O75159 536 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MTX2O75431 263 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DLGAP3O95886 979 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 GNLYP22749 145 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 DLSTP36957 453 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TSPAN7P41732 249 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 MMP13P45452 471 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 RAB15P59190 212 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 UBXN1Q04323 297 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ITKQ08881 620 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ERV3-1Q14264 604 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 GALNT3Q14435 633 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 KCNAB1Q14722 419 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 NCAPHQ15003 741 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 PYCR3Q53H96 274 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TMCO3Q6UWJ1 677 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 ADAMTSL4Q6UY14 1074 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 APTXQ7Z2E3 356 aaKnown RBP5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 TECPR1Q7Z6L1 1165 aa5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 CBARPQ8N350 705 aaPredicted RBP5.94□□□□□ -1.46
HLA-DPA3-207ENST00000454398 OR10G6Q8NH81 332 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms