RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 SDC3O75056 442 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 CRTAMO95727 393 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 TPH1P17752 444 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 GRIA1P42261 906 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 ID4P47928 161 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 SRP54P61011 504 aaKnown RBP27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 BASP1P80723 227 aaKnown RBP27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 CDH17Q12864 832 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 ZDHHC20Q5W0Z9 365 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 NAXDQ8IW45 347 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 PHACTR4Q8IZ21 702 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 SLC25A45Q8N413 288 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 TRAM1L1Q8N609 369 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 DTX3LQ8TDB6 740 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 BTN2A2Q8WVV5 523 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 SLCO2A1Q92959 643 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 TSACCQ96A04 125 aaPredicted RBP27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 HIC2Q96JB3 615 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 C19orf43Q9BQ61 176 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 ZSCAN5AQ9BUG6 496 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 SPATA16Q9BXB7 569 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 FRMD8Q9BZ67 464 aaPredicted RBP27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 TCEAL2Q9H3H9 227 aaPredicted RBP27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 CASS4Q9NQ75 786 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 PIH1D1Q9NWS0 290 aaKnown RBP27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 KLQ9UEF7 1012 aa27.82■■■□□ 2.04
SMARCC1-203ENST00000454240 H3BM21 787 aa27.81■■■□□ 2.04
SMARCC1-203ENST00000454240 STX7O15400 261 aaKnown RBP27.81■■■□□ 2.04
SMARCC1-203ENST00000454240 LDB2O43679 373 aa27.81■■■□□ 2.04
SMARCC1-203ENST00000454240 CSRP1P21291 193 aaKnown RBP27.81■■■□□ 2.04
SMARCC1-203ENST00000454240 HK3P52790 923 aa27.81■■■□□ 2.04
SMARCC1-203ENST00000454240 PDE1BQ01064 536 aa27.81■■■□□ 2.04
SMARCC1-203ENST00000454240 GPS1Q13098 491 aa27.81■■■□□ 2.04
SMARCC1-203ENST00000454240 PTPRCAPQ14761 206 aa27.81■■■□□ 2.04
SMARCC1-203ENST00000454240 KCTD16Q68DU8 428 aa27.81■■■□□ 2.04
SMARCC1-203ENST00000454240 PDPK2PQ6A1A2 396 aa27.81■■■□□ 2.04
SMARCC1-203ENST00000454240 OR1E3Q8WZA6 343 aa27.81■■■□□ 2.04
SMARCC1-203ENST00000454240 TBATAQ96M53 351 aa27.81■■■□□ 2.04
SMARCC1-203ENST00000454240 FGF22Q9HCT0 170 aa27.81■■■□□ 2.04
SMARCC1-203ENST00000454240 IL26Q9NPH9 171 aa27.81■■■□□ 2.04
SMARCC1-203ENST00000454240 BTBD3Q9Y2F9 522 aa27.81■■■□□ 2.04
SMARCC1-203ENST00000454240 KCTD3Q9Y597 815 aa27.81■■■□□ 2.04
SMARCC1-203ENST00000454240 DGKBQ9Y6T7 804 aa27.81■■■□□ 2.04
SMARCC1-203ENST00000454240 CCDC188H7C350 402 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 RASGRP1O95267 797 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 ECEL1O95672 775 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 GAS8O95995 478 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 CEACAM5P06731 702 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 TPSB2P20231 275 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 SPAM1P38567 509 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 VPS41P49754 854 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 BLKP51451 505 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 TPSAB1Q15661 275 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 PPP1R21Q6ZMI0 780 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 HID1Q8IV36 788 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 RBFAQ8N0V3 343 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 DNAAF3Q8N9W5 541 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 OR4K2Q8NGD2 314 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 SETD7Q8WTS6 366 aaKnown RBP27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 PDXPQ96GD0 296 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 CAMK1GQ96NX5 476 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 SLC13A1Q9BZW2 595 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 MRPL40Q9NQ50 206 aaKnown RBP27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 UCKL1Q9NWZ5 548 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 APOBEC3BQ9UH17 382 aaKnown RBP27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 SLC17A4Q9Y2C5 497 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 SPTBN4Q9H254 2564 aa27.8■■■□□ 2.04
SMARCC1-203ENST00000454240 BPTFQ12830 3046 aa27.79■■■□□ 2.04
SMARCC1-203ENST00000454240 PLXNB3Q9ULL4 1909 aa27.79■■■□□ 2.04
SMARCC1-203ENST00000454240 DCDC2BA2VCK2 349 aa27.79■■■□□ 2.04
SMARCC1-203ENST00000454240 INPP4BO15327 924 aa27.79■■■□□ 2.04
SMARCC1-203ENST00000454240 CBFA2T3O75081 653 aa27.79■■■□□ 2.04
SMARCC1-203ENST00000454240 GRK6P43250 576 aa27.79■■■□□ 2.04
SMARCC1-203ENST00000454240 MAGEA6P43360 314 aa27.79■■■□□ 2.04
SMARCC1-203ENST00000454240 ZNF140P52738 457 aaPredicted RBP27.79■■■□□ 2.04
SMARCC1-203ENST00000454240 CDK16Q00536 496 aa27.79■■■□□ 2.04
SMARCC1-203ENST00000454240 POU6F1Q14863 301 aa27.79■■■□□ 2.04
SMARCC1-203ENST00000454240 ZNF548Q8NEK5 533 aaPredicted RBP27.79■■■□□ 2.04
SMARCC1-203ENST00000454240 PCOLCE2Q9UKZ9 415 aa27.79■■■□□ 2.04
SMARCC1-203ENST00000454240 COL5A1P20908 1838 aaPredicted RBP27.78■■■□□ 2.04
SMARCC1-203ENST00000454240 PRSS38A1L453 326 aa27.78■■■□□ 2.04
SMARCC1-203ENST00000454240 GAPDHSO14556 408 aaPredicted RBP27.78■■■□□ 2.04
SMARCC1-203ENST00000454240 TNFP01375 233 aa27.78■■■□□ 2.04
SMARCC1-203ENST00000454240 FUCA1P04066 466 aa27.78■■■□□ 2.04
SMARCC1-203ENST00000454240 PTGIRP43119 386 aa27.78■■■□□ 2.04
SMARCC1-203ENST00000454240 KCNJ11Q14654 390 aa27.78■■■□□ 2.04
SMARCC1-203ENST00000454240 CERCAMQ5T4B2 595 aa27.78■■■□□ 2.04
SMARCC1-203ENST00000454240 RD3Q7Z3Z2 195 aa27.78■■■□□ 2.04
SMARCC1-203ENST00000454240 TRIM74Q86UV6 250 aa27.78■■■□□ 2.04
SMARCC1-203ENST00000454240 DEFB124Q8NES8 71 aa27.78■■■□□ 2.04
SMARCC1-203ENST00000454240 BAHD1Q8TBE0 780 aaPredicted RBP27.78■■■□□ 2.04
SMARCC1-203ENST00000454240 RHBDD1Q8TEB9 315 aa27.78■■■□□ 2.04
SMARCC1-203ENST00000454240 SCARF2Q96GP6 870 aaPredicted RBP27.78■■■□□ 2.04
SMARCC1-203ENST00000454240 RUNDC3BQ96NL0 473 aa27.78■■■□□ 2.04
SMARCC1-203ENST00000454240 LRRC61Q9BV99 259 aa27.78■■■□□ 2.04
SMARCC1-203ENST00000454240 SPASTQ9UBP0 616 aa27.78■■■□□ 2.04
SMARCC1-203ENST00000454240 CSNK1G3Q9Y6M4 447 aa27.78■■■□□ 2.04
SMARCC1-203ENST00000454240 TCRBV7S3A2A0A539 114 aa27.77■■■□□ 2.04
SMARCC1-203ENST00000454240 GIMD1P0DJR0 217 aa27.77■■■□□ 2.04
SMARCC1-203ENST00000454240 INAVAQ3KP66 663 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms