RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 PCNAP12004 261 aa18.61■□□□□ 0.57
PTPA-223ENST00000452489 CAPN3P20807 821 aa18.61■□□□□ 0.57
PTPA-223ENST00000452489 CYP2A7P20853 494 aa18.61■□□□□ 0.57
PTPA-223ENST00000452489 TAGLNQ01995 201 aaKnown RBP18.61■□□□□ 0.57
PTPA-223ENST00000452489 NFIAQ12857 509 aa18.61■□□□□ 0.57
PTPA-223ENST00000452489 RABL3Q5HYI8 236 aa18.61■□□□□ 0.57
PTPA-223ENST00000452489 PRSS48Q7RTY5 328 aa18.61■□□□□ 0.57
PTPA-223ENST00000452489 ZBTB33Q86T24 672 aa18.61■□□□□ 0.57
PTPA-223ENST00000452489 CGRRF1Q99675 332 aa18.61■□□□□ 0.57
PTPA-223ENST00000452489 NTPCRQ9BSD7 190 aaKnown RBP18.61■□□□□ 0.57
PTPA-223ENST00000452489 FAM49AQ9H0Q0 323 aaPredicted RBP18.61■□□□□ 0.57
PTPA-223ENST00000452489 A0A0J9YYE9 177 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 USP2O75604 605 aaPredicted RBP18.6■□□□□ 0.57
PTPA-223ENST00000452489 ALDOCP09972 364 aaKnown RBP18.6■□□□□ 0.57
PTPA-223ENST00000452489 PDGFRAP16234 1089 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 ACVR2AP27037 513 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 ZNF404Q494X3 552 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 BEND5Q7L4P6 421 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 NT5DC4Q86YG4 428 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 CENPLQ8N0S6 344 aaPredicted RBP18.6■□□□□ 0.57
PTPA-223ENST00000452489 TXNDC5Q8NBS9 432 aaKnown RBP18.6■□□□□ 0.57
PTPA-223ENST00000452489 PAPD5Q8NDF8 572 aaKnown RBP18.6■□□□□ 0.57
PTPA-223ENST00000452489 C8orf48Q96LL4 319 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 FYTTD1Q96QD9 318 aaKnown RBP18.6■□□□□ 0.57
PTPA-223ENST00000452489 PIF1Q9H611 641 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 ZBTB20Q9HC78 741 aaPredicted RBP18.6■□□□□ 0.57
PTPA-223ENST00000452489 PRDM8Q9NQV8 689 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 FADS2P1A8MWK0 482 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 KPNA6O60684 536 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 LYPLA2O95372 231 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 HLA-DOAP06340 250 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 GPD1P21695 349 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 CYP2F1P24903 491 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 CD6P30203 668 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 UQCRC1P31930 480 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 GSK3BP49841 420 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 FRG1Q14331 258 aaKnown RBP18.6■□□□□ 0.57
PTPA-223ENST00000452489 STK11Q15831 433 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 TYSND1Q2T9J0 566 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 SPANXN3Q5MJ09 141 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 UBE2Q1Q7Z7E8 422 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 HS3ST5Q8IZT8 346 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 CNIH3Q8TBE1 160 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 CCDC17Q96LX7 622 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 TSNARE1Q96NA8 513 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 HOPXQ9BPY8 73 aaPredicted RBP18.6■□□□□ 0.57
PTPA-223ENST00000452489 POMKQ9H5K3 350 aa18.6■□□□□ 0.57
PTPA-223ENST00000452489 TBC1D4O60343 1298 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 RAP1GAPP47736 663 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 SLC9A3P48764 834 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 TARDBPQ13148 414 aaKnown RBP eCLIP18.59■□□□□ 0.57
PTPA-223ENST00000452489 GALNT7Q86SF2 657 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 DNAJB14Q8TBM8 379 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 MCOLN3Q8TDD5 553 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 SLC39A13Q96H72 371 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 NEDD4LQ96PU5 975 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 CNPY3Q9BT09 278 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 SNRNP25Q9BV90 132 aaKnown RBP18.59■□□□□ 0.57
PTPA-223ENST00000452489 BEX2Q9BXY8 128 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 DCSTAMPQ9H295 470 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 CYP4F12Q9HCS2 524 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 NGRNQ9NPE2 291 aaKnown RBP18.59■□□□□ 0.57
PTPA-223ENST00000452489 AASSQ9UDR5 926 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 CCNE2O96020 404 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 APOA1P02647 267 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 SLC35E2BP0CK96 405 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 GPX3P22352 226 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 WEE1P30291 646 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 AP2S1P53680 142 aaPredicted RBP18.59■□□□□ 0.57
PTPA-223ENST00000452489 KIF19Q2TAC6 998 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 BCL7AQ4VC05 210 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 ERAP2Q6P179 960 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 PNCKQ6P2M8 343 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 NOXA1Q86UR1 476 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 APPL2Q8NEU8 664 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 QKIQ96PU8 341 aaKnown RBP eCLIP18.59■□□□□ 0.574e-8■■■■□ 21.8
PTPA-223ENST00000452489 LGMNQ99538 433 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 NAT9Q9BTE0 207 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 RANGRFQ9HD47 186 aaPredicted RBP18.59■□□□□ 0.57
PTPA-223ENST00000452489 GIMAP2Q9UG22 337 aa18.59■□□□□ 0.57
PTPA-223ENST00000452489 MAGEB16A2A368 324 aa18.58■□□□□ 0.57
PTPA-223ENST00000452489 SPATA31C2B4DYI2 1134 aa18.58■□□□□ 0.57
PTPA-223ENST00000452489 PRKD3O94806 890 aa18.58■□□□□ 0.57
PTPA-223ENST00000452489 CYP3A5P20815 502 aa18.58■□□□□ 0.57
PTPA-223ENST00000452489 PSMB4P28070 264 aa18.58■□□□□ 0.57
PTPA-223ENST00000452489 SERPINH1P50454 418 aaKnown RBP18.58■□□□□ 0.57
PTPA-223ENST00000452489 USP10Q14694 798 aaKnown RBP18.58■□□□□ 0.57
PTPA-223ENST00000452489 FUT11Q495W5 492 aa18.58■□□□□ 0.57
PTPA-223ENST00000452489 TPRG1LQ5T0D9 272 aa18.58■□□□□ 0.57
PTPA-223ENST00000452489 TTC23Q5W5X9 447 aa18.58■□□□□ 0.57
PTPA-223ENST00000452489 CLEC6AQ6EIG7 209 aa18.58■□□□□ 0.57
PTPA-223ENST00000452489 CES5AQ6NT32 575 aa18.58■□□□□ 0.57
PTPA-223ENST00000452489 C4orf19Q8IY42 314 aa18.58■□□□□ 0.57
PTPA-223ENST00000452489 MINDY1Q8N5J2 469 aa18.58■□□□□ 0.57
PTPA-223ENST00000452489 OR52K1Q8NGK4 314 aa18.58■□□□□ 0.57
PTPA-223ENST00000452489 MCRS1Q96EZ8 462 aa18.58■□□□□ 0.57
PTPA-223ENST00000452489 GMCL1Q96IK5 515 aa18.58■□□□□ 0.57
PTPA-223ENST00000452489 ACAT2Q9BWD1 397 aa18.58■□□□□ 0.57
PTPA-223ENST00000452489 NIF3L1Q9GZT8 377 aa18.58■□□□□ 0.57
PTPA-223ENST00000452489 ALG2Q9H553 416 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms