RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ADCY8P40145 1251 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 ACTR1BP42025 376 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 MAZP56270 477 aaKnown RBP12.82□□□□□ -0.36
CHD3-206ENST00000452447 TMPRSS3P57727 454 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 ACTR1AP61163 376 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 DYNLT1P63172 113 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 ZBTB17Q13105 803 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 TRIM74Q86UV6 250 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 CNTD1Q8N815 330 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 PTCD2Q8WV60 388 aaKnown RBP12.82□□□□□ -0.36
CHD3-206ENST00000452447 AGAP3Q96P47 875 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 BBC3Q96PG8 261 aaPredicted RBP12.82□□□□□ -0.36
CHD3-206ENST00000452447 OR2M4Q96R27 311 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 RIOK2Q9BVS4 552 aaKnown RBP12.82□□□□□ -0.36
CHD3-206ENST00000452447 TRIM5Q9C035 493 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 BRD8Q9H0E9 1235 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 PKD2L2Q9NZM6 624 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 ATXN7L1Q9ULK2 861 aaPredicted RBP12.82□□□□□ -0.36
CHD3-206ENST00000452447 KALRNO60229 2985 aa12.82□□□□□ -0.36
CHD3-206ENST00000452447 TEX51A0A1B0GUA7 166 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 C3orf70A6NLC5 250 aaPredicted RBP12.81□□□□□ -0.36
CHD3-206ENST00000452447 CDRT15L2A8MXV6 281 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 INPP4BO15327 924 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 ECEL1O95672 775 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 MMP2P08253 660 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 JMJD7P0C870 316 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 UGT1A5P35504 534 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 NOP2P46087 812 aaKnown RBP12.81□□□□□ -0.36
CHD3-206ENST00000452447 SKOR1P84550 965 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 COL9A2Q14055 689 aaPredicted RBP12.81□□□□□ -0.36
CHD3-206ENST00000452447 QPCTQ16769 361 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 AMZ1Q400G9 498 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 MAP9Q49MG5 647 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 NPNTQ6UXI9 565 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 MARK2Q7KZI7 788 aaKnown RBP12.81□□□□□ -0.36
CHD3-206ENST00000452447 BZW1Q7L1Q6 419 aaKnown RBP12.81□□□□□ -0.36
CHD3-206ENST00000452447 NT5DC3Q86UY8 548 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 PIM3Q86V86 326 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 GALNT13Q8IUC8 556 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 SCARF2Q96GP6 870 aaPredicted RBP12.81□□□□□ -0.36
CHD3-206ENST00000452447 AGAP2Q99490 1192 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 CEP41Q9BYV8 373 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 FAM83DQ9H4H8 585 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 WDR70Q9NW82 654 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.81□□□□□ -0.36
CHD3-206ENST00000452447 HYOU1Q9Y4L1 999 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 SCN8AQ9UQD0 1980 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 CPNE6O95741 557 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 COMTP21964 271 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 MAGEA1P43355 309 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 NR2C2P49116 596 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 SPINT3P49223 89 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 TBX2Q13207 712 aaPredicted RBP12.81□□□□□ -0.36
CHD3-206ENST00000452447 LRP8Q14114 963 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 TCEAL1Q15170 157 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 PYCR3Q53H96 274 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 PHF19Q5T6S3 580 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 KDELC2Q7Z4H8 507 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 CLEC14AQ86T13 490 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 JAMLQ86YT9 394 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 TMEM159Q96B96 161 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 OLFM3Q96PB7 478 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 CMKLR1Q99788 373 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 ZFYVE1Q9HBF4 777 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 RDH14Q9HBH5 336 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 ZNHIT2Q9UHR6 403 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 LOXL2Q9Y4K0 774 aa12.81□□□□□ -0.36
CHD3-206ENST00000452447 RGSL1A5PLK6 1076 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 AGRPO00253 132 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 ATP1A1P05023 1023 aaKnown RBP12.8□□□□□ -0.36
CHD3-206ENST00000452447 HGFP14210 728 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 GPR3P46089 330 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 OR1D5P58170 312 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 B4GALNT1Q00973 533 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 ZFP36L1Q07352 338 aaKnown RBP12.8□□□□□ -0.36
CHD3-206ENST00000452447 GALNT3Q14435 633 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 ARHGAP40Q5TG30 622 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 CCDC70Q6NSX1 233 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 SARM1Q6SZW1 724 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 MFSD7Q6UXD7 560 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 USP53Q70EK8 1073 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 C17orf82Q86X59 251 aaPredicted RBP12.8□□□□□ -0.36
CHD3-206ENST00000452447 NAGSQ8N159 534 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 PATE1Q8WXA2 126 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 IMP4Q96G21 291 aaKnown RBP12.8□□□□□ -0.36
CHD3-206ENST00000452447 COX14Q96I36 57 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 SLC25A51Q9H1U9 297 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 CPNE5Q9HCH3 593 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 AKAP7Q9P0M2 348 aaPredicted RBP12.8□□□□□ -0.36
CHD3-206ENST00000452447 VPS18Q9P253 973 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 PISDQ9UG56 409 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 PLEKHM1Q9Y4G2 1056 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 PCDHGA7Q9Y5G6 932 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 ST14Q9Y5Y6 855 aa12.8□□□□□ -0.36
CHD3-206ENST00000452447 B4GAT1O43505 415 aa12.79□□□□□ -0.36
CHD3-206ENST00000452447 PSTPIP1O43586 416 aa12.79□□□□□ -0.36
CHD3-206ENST00000452447 SLC5A2P31639 672 aa12.79□□□□□ -0.36
CHD3-206ENST00000452447 CDK18Q07002 472 aa12.79□□□□□ -0.36
CHD3-206ENST00000452447 TFDP2Q14188 446 aa12.79□□□□□ -0.36
CHD3-206ENST00000452447 SPA17Q15506 151 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms