RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 CDH19Q9H159 772 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 DDX56Q9NY93 547 aaKnown RBP12.41□□□□□ -0.42
CPSF4-208ENST00000452047 SSUH2Q9Y2M2 353 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 TMEM98Q9Y2Y6 226 aa12.41□□□□□ -0.42
CPSF4-208ENST00000452047 PLD2O14939 933 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 PPP1R12AO14974 1030 aaPredicted RBP12.4□□□□□ -0.42
CPSF4-208ENST00000452047 SPOPO43791 374 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 TNFSF15O95150 251 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 LCA5LO95447 670 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 ZFXP17010 805 aaPredicted RBP12.4□□□□□ -0.42
CPSF4-208ENST00000452047 SPINT3P49223 89 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 B4GALNT1Q00973 533 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 ZFP36L1Q07352 338 aaKnown RBP12.4□□□□□ -0.42
CPSF4-208ENST00000452047 EIF3IQ13347 325 aaKnown RBP12.4□□□□□ -0.42
CPSF4-208ENST00000452047 GALNT3Q14435 633 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 PYCR3Q53H96 274 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 FOXR1Q6PIV2 292 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 TMPRSS9Q7Z410 1059 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 RFX6Q8HWS3 928 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 SLITRK4Q8IW52 837 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 NAGSQ8N159 534 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 ARL14Q8N4G2 192 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 EXD1Q8NHP7 514 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 KCNE4Q8WWG9 221 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 PATE1Q8WXA2 126 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 EID2BQ96D98 161 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 TMEM74Q96NL1 305 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 AGAP3Q96P47 875 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 OR2M4Q96R27 311 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 MLPHQ9BV36 600 aaPredicted RBP12.4□□□□□ -0.42
CPSF4-208ENST00000452047 MAK16Q9BXY0 300 aaKnown RBP12.4□□□□□ -0.42
CPSF4-208ENST00000452047 ADGRE3Q9BY15 652 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 DPH1Q9BZG8 443 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 BRD8Q9H0E9 1235 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 GOLPH3Q9H4A6 298 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 EPB41L5Q9HCM4 733 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 ATXN7L1Q9ULK2 861 aaPredicted RBP12.4□□□□□ -0.42
CPSF4-208ENST00000452047 CNOT6Q9ULM6 557 aaKnown RBP12.4□□□□□ -0.42
CPSF4-208ENST00000452047 PLEKHM1Q9Y4G2 1056 aa12.4□□□□□ -0.42
CPSF4-208ENST00000452047 PCYT1BQ9Y5K3 369 aaPredicted RBP12.4□□□□□ -0.42
CPSF4-208ENST00000452047 OAS3Q9Y6K5 1087 aaKnown RBP12.4□□□□□ -0.42
CPSF4-208ENST00000452047 FADS2P1A8MWK0 482 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 TMX2-CTNND1H3BSU7 103 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 INPP4BO15327 924 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 B4GAT1O43505 415 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 PSTPIP1O43586 416 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 DNAJC6O75061 913 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 ECEL1O95672 775 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 TNNT1P13805 278 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 ACTR1BP42025 376 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 NOP2P46087 812 aaKnown RBP12.39□□□□□ -0.43
CPSF4-208ENST00000452047 ACTR1AP61163 376 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 DYNLT1P63172 113 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 PRKD1Q15139 912 aaPredicted RBP12.39□□□□□ -0.43
CPSF4-208ENST00000452047 SLC14A2Q15849 920 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 B4GALNT4Q76KP1 1039 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 RAB11FIP2Q7L804 512 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 LYSMD3Q7Z3D4 306 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 NT5DC3Q86UY8 548 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 UBL7Q96S82 380 aaPredicted RBP12.39□□□□□ -0.43
CPSF4-208ENST00000452047 TRIM5Q9C035 493 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 STRADBQ9C0K7 418 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 SLC25A51Q9H1U9 297 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 VPS18Q9P253 973 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 SAE1Q9UBE0 346 aaPredicted RBP12.39□□□□□ -0.43
CPSF4-208ENST00000452047 ALG6Q9Y672 507 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 GCN1Q92616 2671 aaKnown RBP12.39□□□□□ -0.43
CPSF4-208ENST00000452047 AHCTF1Q8WYP5 2266 aa12.39□□□□□ -0.43
CPSF4-208ENST00000452047 BOD1L1Q8NFC6 3051 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 RGSL1A5PLK6 1076 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 KLK10O43240 276 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 MT-CYBP00156 380 aaPredicted RBP12.38□□□□□ -0.43
CPSF4-208ENST00000452047 ATP1A1P05023 1023 aaKnown RBP12.38□□□□□ -0.43
CPSF4-208ENST00000452047 HGFP14210 728 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 PECAM1P16284 738 aaPredicted RBP12.38□□□□□ -0.43
CPSF4-208ENST00000452047 PTPN3P26045 913 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 UGT1A5P35504 534 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 MAGEA1P43355 309 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 NR2C2P49116 596 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 UCNP55089 124 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 TMPRSS3P57727 454 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 OR1D5P58170 312 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 CXADRP78310 365 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 ADCY2Q08462 1091 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 PEX6Q13608 980 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 LRP8Q14114 963 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 TFDP2Q14188 446 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 TEX44Q53QW1 395 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 ODF2Q5BJF6 829 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 SPOCD1Q6ZMY3 1216 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 MARK2Q7KZI7 788 aaKnown RBP12.38□□□□□ -0.43
CPSF4-208ENST00000452047 GPR155Q7Z3F1 870 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 GALNT13Q8IUC8 556 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 CCDC170Q8IYT3 715 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 FBXO39Q8N4B4 442 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 SPATA22Q8NHS9 363 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 CCHCR1Q8TD31 782 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 FAM83DQ9H4H8 585 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 ZFYVE1Q9HBF4 777 aa12.38□□□□□ -0.43
CPSF4-208ENST00000452047 GLOD4Q9HC38 313 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms