RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 Q6ZVL8 140 aa21.58■■□□□ 1.05
C9orf3-208ENST00000451893 TSPAN33Q86UF1 283 aa21.58■■□□□ 1.05
C9orf3-208ENST00000451893 CCNJLQ8IV13 435 aa21.58■■□□□ 1.05
C9orf3-208ENST00000451893 KATNAL2Q8IYT4 538 aa21.58■■□□□ 1.05
C9orf3-208ENST00000451893 TEX26Q8N6G2 289 aa21.58■■□□□ 1.05
C9orf3-208ENST00000451893 SPOCK2Q92563 424 aa21.58■■□□□ 1.05
C9orf3-208ENST00000451893 AP2M1Q96CW1 435 aa21.58■■□□□ 1.05
C9orf3-208ENST00000451893 TMEM74Q96NL1 305 aa21.58■■□□□ 1.05
C9orf3-208ENST00000451893 UBL7Q96S82 380 aaPredicted RBP21.58■■□□□ 1.05
C9orf3-208ENST00000451893 ZMYND15Q9H091 742 aa21.58■■□□□ 1.05
C9orf3-208ENST00000451893 LRRN3Q9H3W5 708 aa21.58■■□□□ 1.05
C9orf3-208ENST00000451893 CD84Q9UIB8 345 aa21.58■■□□□ 1.05
C9orf3-208ENST00000451893 TNFSF15O95150 251 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 TUBBP07437 444 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 CCNB1P14635 433 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 GLB1P16278 677 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 GM2AP17900 193 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 LHCGRP22888 699 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 UCNP55089 124 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 INHBCP55103 352 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 TMPRSS3P57727 454 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 TAS2R40P59535 323 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 CDK3Q00526 305 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 COL9A2Q14055 689 aaPredicted RBP21.57■■□□□ 1.04
C9orf3-208ENST00000451893 KIF26BQ2KJY2 2108 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 C14orf28Q4W4Y0 310 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 LRRC66Q68CR7 880 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 CCDC70Q6NSX1 233 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 GPR155Q7Z3F1 870 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 JAMLQ86YT9 394 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 CCDC13Q8IYE1 715 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 SPATA4Q8NEY3 305 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 LPCAT1Q8NF37 534 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 FAM71BQ8TC56 605 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 MAIP1Q8WWC4 291 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 ALG3Q92685 438 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 LRIT1Q9P2V4 623 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 AMACRQ9UHK6 382 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 CHKBQ9Y259 395 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 PCDHGA8Q9Y5G5 932 aa21.57■■□□□ 1.04
C9orf3-208ENST00000451893 RHPN2P1A8MT19 583 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 D6RAR5 112 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 CCDC188H7C350 402 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 DYNC1I1O14576 645 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 PYGLP06737 847 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 ZNF30P17039 623 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 ARSEP51690 589 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 COPS2P61201 443 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 TLE3Q04726 772 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 MAP9Q49MG5 647 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 SOWAHCQ53LP3 525 aaPredicted RBP21.56■■□□□ 1.04
C9orf3-208ENST00000451893 KCTD16Q68DU8 428 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 CPNE8Q86YQ8 564 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 RCOR2Q8IZ40 523 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 PELI3Q8N2H9 469 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 FBXO39Q8N4B4 442 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 MMGT1Q8N4V1 131 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 GPR156Q8NFN8 814 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 EXD1Q8NHP7 514 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 CCL4L1Q8NHW4 92 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 ZDHHC1Q8WTX9 485 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 KRT35Q92764 455 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 MCCC1Q96RQ3 725 aaPredicted RBP21.56■■□□□ 1.04
C9orf3-208ENST00000451893 TEX101Q9BY14 249 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 FOXP3Q9BZS1 431 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 CDH19Q9H159 772 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 RABGEF1Q9UJ41 708 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 SUFUQ9UMX1 484 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 HEY1Q9Y5J3 304 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 UNC13CQ8NB66 2214 aa21.56■■□□□ 1.04
C9orf3-208ENST00000451893 ARHGEF17Q96PE2 2063 aaPredicted RBP21.56■■□□□ 1.04
C9orf3-208ENST00000451893 ZRANB2O95218 330 aaKnown RBP eCLIP21.55■■□□□ 1.04
C9orf3-208ENST00000451893 ASMTLO95671 621 aa21.55■■□□□ 1.04
C9orf3-208ENST00000451893 PDHA1P08559 390 aa21.55■■□□□ 1.04
C9orf3-208ENST00000451893 JMJD7P0C870 316 aa21.55■■□□□ 1.04
C9orf3-208ENST00000451893 KDELR1P24390 212 aa21.55■■□□□ 1.04
C9orf3-208ENST00000451893 GBE1Q04446 702 aa21.55■■□□□ 1.04
C9orf3-208ENST00000451893 AP1B1Q10567 949 aa21.55■■□□□ 1.04
C9orf3-208ENST00000451893 EIF3IQ13347 325 aaKnown RBP21.55■■□□□ 1.04
C9orf3-208ENST00000451893 GLE1Q53GS7 698 aaKnown RBP21.55■■□□□ 1.04
C9orf3-208ENST00000451893 SLC30A9Q6PML9 568 aa21.55■■□□□ 1.04
C9orf3-208ENST00000451893 RAB11FIP2Q7L804 512 aa21.55■■□□□ 1.04
C9orf3-208ENST00000451893 LRRN4Q8WUT4 740 aa21.55■■□□□ 1.04
C9orf3-208ENST00000451893 PIH1D2Q8WWB5 315 aa21.55■■□□□ 1.04
C9orf3-208ENST00000451893 MAML1Q92585 1016 aa21.55■■□□□ 1.04
C9orf3-208ENST00000451893 RBM41Q96IZ5 413 aaKnown RBP21.55■■□□□ 1.04
C9orf3-208ENST00000451893 SLC46A1Q96NT5 459 aa21.55■■□□□ 1.04
C9orf3-208ENST00000451893 DPH1Q9BZG8 443 aa21.55■■□□□ 1.04
C9orf3-208ENST00000451893 PRORYQ9H606 182 aa21.55■■□□□ 1.04
C9orf3-208ENST00000451893 PCDH9Q9HC56 1237 aa21.55■■□□□ 1.04
C9orf3-208ENST00000451893 AKAP7Q9P0M2 348 aaPredicted RBP21.55■■□□□ 1.04
C9orf3-208ENST00000451893 SEPT10Q9P0V9 454 aa21.55■■□□□ 1.04
C9orf3-208ENST00000451893 A0A0J9YYE9 177 aa21.54■■□□□ 1.04
C9orf3-208ENST00000451893 AGRPO00253 132 aa21.54■■□□□ 1.04
C9orf3-208ENST00000451893 NTN3O00634 580 aaPredicted RBP21.54■■□□□ 1.04
C9orf3-208ENST00000451893 APOL1O14791 398 aa21.54■■□□□ 1.04
C9orf3-208ENST00000451893 PLD2O14939 933 aa21.54■■□□□ 1.04
C9orf3-208ENST00000451893 TRBC1P01850 177 aa21.54■■□□□ 1.04
C9orf3-208ENST00000451893 KRT1P04264 644 aa21.54■■□□□ 1.04
C9orf3-208ENST00000451893 HLA-DQB2P05538 268 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms