RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 DCLK2Q8N568 766 aa23.93■■□□□ 1.42
CPSF4-207ENST00000451876 STYXQ8WUJ0 223 aa23.93■■□□□ 1.42
CPSF4-207ENST00000451876 FUBP1Q96AE4 644 aaKnown RBP23.93■■□□□ 1.42
CPSF4-207ENST00000451876 KLHDC7BQ96G42 594 aa23.93■■□□□ 1.42
CPSF4-207ENST00000451876 SIGLEC10Q96LC7 697 aa23.93■■□□□ 1.42
CPSF4-207ENST00000451876 LGR4Q9BXB1 951 aa23.93■■□□□ 1.42
CPSF4-207ENST00000451876 SPATA16Q9BXB7 569 aa23.93■■□□□ 1.42
CPSF4-207ENST00000451876 CDH19Q9H159 772 aa23.93■■□□□ 1.42
CPSF4-207ENST00000451876 CAPN10Q9HC96 672 aa23.93■■□□□ 1.42
CPSF4-207ENST00000451876 EPB41L5Q9HCM4 733 aa23.93■■□□□ 1.42
CPSF4-207ENST00000451876 RAD18Q9NS91 495 aa23.93■■□□□ 1.42
CPSF4-207ENST00000451876 GLYATL1P3A0A0U1RQE8 302 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 DRG2P55039 364 aaKnown RBP23.92■■□□□ 1.42
CPSF4-207ENST00000451876 DHX9Q08211 1270 aaKnown RBP23.92■■□□□ 1.42
CPSF4-207ENST00000451876 SPEM2Q0P670 501 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 IQCHQ86VS3 1027 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 CEP76Q8TAP6 659 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 ART4Q93070 314 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 APOOQ9BUR5 198 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 KIFC1Q9BW19 673 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 WDR26Q9H7D7 661 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 SUDS3Q9H7L9 328 aaPredicted RBP23.92■■□□□ 1.42
CPSF4-207ENST00000451876 SOX13Q9UN79 622 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 SDR42E2A6NKP2 422 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 TLR4O00206 839 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 INPP4BO15327 924 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 NMBRP28336 390 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 CA5AP35218 305 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 RABIFP47224 123 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 PLTPP55058 493 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 XIAPP98170 497 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 CDK3Q00526 305 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 PEX6Q13608 980 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 PDE1CQ14123 709 aaPredicted RBP23.92■■□□□ 1.42
CPSF4-207ENST00000451876 TEAD4Q15561 434 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 HIF1AQ16665 826 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 ATP13A5Q4VNC0 1218 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 ZDHHC20Q5W0Z9 365 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 CASC4Q6P4E1 433 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 CES3Q6UWW8 571 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 RABEPKQ7Z6M1 372 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 TRAM1L1Q8N609 369 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 FBXO25Q8TCJ0 367 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 MFSD3Q96ES6 412 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 C19orf43Q9BQ61 176 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 ZSCAN5AQ9BUG6 496 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 TEX101Q9BY14 249 aa23.92■■□□□ 1.42
CPSF4-207ENST00000451876 FRMD8Q9BZ67 464 aaPredicted RBP23.92■■□□□ 1.42
CPSF4-207ENST00000451876 NDC80O14777 642 aa23.91■■□□□ 1.42
CPSF4-207ENST00000451876 PRAMEF1O95521 474 aa23.91■■□□□ 1.42
CPSF4-207ENST00000451876 RHOXF2BP0C7M4 288 aa23.91■■□□□ 1.42
CPSF4-207ENST00000451876 PSMA3P25788 255 aa23.91■■□□□ 1.42
CPSF4-207ENST00000451876 HADHAP40939 763 aa23.91■■□□□ 1.42
CPSF4-207ENST00000451876 IRX4P78413 519 aa23.91■■□□□ 1.42
CPSF4-207ENST00000451876 ACVR1Q04771 509 aa23.91■■□□□ 1.42
CPSF4-207ENST00000451876 OVGP1Q12889 678 aa23.91■■□□□ 1.42
CPSF4-207ENST00000451876 CHRNA6Q15825 494 aa23.91■■□□□ 1.42
CPSF4-207ENST00000451876 TRIM74Q86UV6 250 aa23.91■■□□□ 1.42
CPSF4-207ENST00000451876 SPATS2Q86XZ4 545 aaKnown RBP23.91■■□□□ 1.42
CPSF4-207ENST00000451876 CDKN2AIPNLQ96HQ2 116 aa23.91■■□□□ 1.42
CPSF4-207ENST00000451876 TBATAQ96M53 351 aa23.91■■□□□ 1.42
CPSF4-207ENST00000451876 RHOXF2Q9BQY4 288 aa23.91■■□□□ 1.42
CPSF4-207ENST00000451876 WDR83Q9BRX9 315 aaKnown RBP23.91■■□□□ 1.42
CPSF4-207ENST00000451876 TREX1Q9NSU2 369 aa23.91■■□□□ 1.42
CPSF4-207ENST00000451876 TMPRSS11EQ9UL52 423 aa23.91■■□□□ 1.42
CPSF4-207ENST00000451876 CNOT6Q9ULM6 557 aaKnown RBP23.91■■□□□ 1.42
CPSF4-207ENST00000451876 ANKRD6Q9Y2G4 727 aa23.91■■□□□ 1.42
CPSF4-207ENST00000451876 EP300Q09472 2414 aaPredicted RBP23.91■■□□□ 1.42
CPSF4-207ENST00000451876 H7C0S8 307 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 TEAD1P28347 426 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 NXPH1P58417 271 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 GRIK2Q13002 908 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 LAMB3Q13751 1172 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 SKIDA1Q1XH10 827 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 KIF19Q2TAC6 998 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 BBS9Q3SYG4 887 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 HP1BP3Q5SSJ5 553 aaPredicted RBP23.9■■□□□ 1.42
CPSF4-207ENST00000451876 TEX35Q5T0J7 233 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 ADAMTSL4Q6UY14 1074 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 PDIK1LQ8N165 341 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 FAM174AQ8TBP5 190 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 PTCD2Q8WV60 388 aaKnown RBP23.9■■□□□ 1.42
CPSF4-207ENST00000451876 RUBCNQ92622 972 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 CAAP1Q9H8G2 361 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 MRM3Q9HC36 420 aaKnown RBP23.9■■□□□ 1.42
CPSF4-207ENST00000451876 PARD6AQ9NPB6 346 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 SAMD15Q9P1V8 674 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 RIMKLBQ9ULI2 386 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 SLC6A14Q9UN76 642 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 SNX11Q9Y5W9 270 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 MAD1L1Q9Y6D9 718 aa23.9■■□□□ 1.42
CPSF4-207ENST00000451876 ZNF292O60281 2723 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 OR51F1A6NGY5 319 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 UGT1A9O60656 530 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 SRP72O76094 671 aaKnown RBP23.89■■□□□ 1.42
CPSF4-207ENST00000451876 UGT1A6P19224 532 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 UGT1A1P22309 533 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 UGT1A4P22310 534 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 MC4RP32245 332 aa23.89■■□□□ 1.42
CPSF4-207ENST00000451876 UGT1A3P35503 534 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms