RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 HIC2Q96JB3 615 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 CAMK1GQ96NX5 476 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 CDC6Q99741 560 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 ZSCAN5AQ9BUG6 496 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 LGR4Q9BXB1 951 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 ARNT2Q9HBZ2 717 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 RNF14Q9UBS8 474 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 DOLKQ9UPQ8 538 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 NCOR2Q9Y618 2525 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 LRRK1Q38SD2 2015 aa13.95□□□□□ -0.18
GTF3C3-206ENST00000448539 TMEM202A6NGA9 273 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 AQP9O43315 295 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 BUD23O43709 281 aaKnown RBP13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 ASMTLO95671 621 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 CEACAM1P13688 526 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 TPH1P17752 444 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 LPOP22079 712 aaPredicted RBP13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 SPAM1P38567 509 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 VPS41P49754 854 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 HK3P52790 923 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 CDH17Q12864 832 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 ELOCQ15369 112 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 TRIP13Q15645 432 aaPredicted RBP13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 ALG11Q2TAA5 492 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 PRRT3Q5FWE3 981 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 PDPK2PQ6A1A2 396 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 DENND5AQ6IQ26 1287 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 PSAPL1Q6NUJ1 521 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 TTC27Q6P3X3 843 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 DOK6Q6PKX4 331 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 SYT10Q6XYQ8 523 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 RBFAQ8N0V3 343 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 TRAM1L1Q8N609 369 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 EID2Q8N6I1 236 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 KNL1Q8NG31 2342 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 PLEKHG4BQ96PX9 1271 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 AGAP2Q99490 1192 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 SUDS3Q9H7L9 328 aaPredicted RBP13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 CYP4F12Q9HCS2 524 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 FGF22Q9HCT0 170 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 IL17CQ9P0M4 197 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 NFKBIL1Q9UBC1 381 aaPredicted RBP13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 KLF15Q9UIH9 416 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 PCOLCE2Q9UKZ9 415 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 BTBD3Q9Y2F9 522 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 ARL5AQ9Y689 179 aa13.94□□□□□ -0.18
GTF3C3-206ENST00000448539 PRSS38A1L453 326 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 FFAR2O15552 330 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 SUN1O94901 812 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 KCNK5O95279 499 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 ECEL1O95672 775 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 SOD1P00441 154 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 ADRB1P08588 477 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 GPS1Q13098 491 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 LAMB3Q13751 1172 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 SEPT6Q14141 434 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 PPP1R7Q15435 360 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 TRIP6Q15654 476 aaKnown RBP13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 FSTL5Q8N475 847 aaPredicted RBP13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 ZNF548Q8NEK5 533 aaPredicted RBP13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 OR52K1Q8NGK4 314 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 OR1E3Q8WZA6 343 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 PDXPQ96GD0 296 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 TBATAQ96M53 351 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 RUNDC3BQ96NL0 473 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 CNTNAP3BQ96NU0 1288 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 DUSP23Q9BVJ7 150 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 CNTNAP3Q9BZ76 1288 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 CARS2Q9HA77 564 aaKnown RBP13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 EIF2B3Q9NR50 452 aaKnown RBP13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 UCKL1Q9NWZ5 548 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 FTSJ1Q9UET6 329 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 CSNK1G3Q9Y6M4 447 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 DGKBQ9Y6T7 804 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 TMEM131Q92545 1883 aa13.93□□□□□ -0.18
GTF3C3-206ENST00000448539 GLYATL1P3A0A0U1RQE8 302 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 FADS2P1A8MWK0 482 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 AP3B1O00203 1094 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 SCAMP1O15126 338 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 SLC25A14O95258 325 aaPredicted RBP13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 LDOC1O95751 146 aaPredicted RBP13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 CEACAM5P06731 702 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 ANXA6P08133 673 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 HADHAP40939 763 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 TERF1P54274 439 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 SARNPP82979 210 aaKnown RBP13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 C1orf61Q13536 156 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 ITGA9Q13797 1035 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 POU6F1Q14863 301 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 FAM151BQ6UXP7 276 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 KANSL1Q7Z3B3 1105 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 TRIM74Q86UV6 250 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 GKN2Q86XP6 184 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 CREG2Q8IUH2 290 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 PHYKPLQ8IUZ5 450 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 SLC25A45Q8N413 288 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 OR4K2Q8NGD2 314 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 GDAP1Q8TB36 358 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 SCG3Q8WXD2 468 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms