RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 CAMK1DQ8IU85 385 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 CCNYQ8ND76 341 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 LRRN4CLQ8ND94 238 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 EXOC2Q96KP1 924 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 QKIQ96PU8 341 aaKnown RBP eCLIP13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 RBM15Q96T37 977 aaKnown RBP eCLIP13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 LRRN3Q9H3W5 708 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 ATP13A3Q9H7F0 1226 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 SYNDIG1Q9H7V2 258 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 SP110Q9HB58 689 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 SIRPGQ9P1W8 387 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 APPL1Q9UKG1 709 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 ATMQ13315 3056 aa13.75□□□□□ -0.21
PDLIM2-213ENST00000448520 J3QKU1 62 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 KCNK1O00180 336 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 CACNB4O00305 520 aaPredicted RBP13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 TNFRSF10CO14798 259 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 PEX11BO96011 259 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 CELA2BP08218 269 aaPredicted RBP13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 RBP3P10745 1247 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 GLB1P16278 677 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 RBL1P28749 1068 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 CCKBRP32239 447 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 MMP12P39900 470 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 PAFAH1B1P43034 410 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 NR2C2P49116 596 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 PDX1P52945 283 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 INHBCP55103 352 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 CCL7P80098 99 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 MRPS25P82663 173 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 PPIDQ08752 370 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 AP1B1Q10567 949 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 CLN3Q13286 438 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 PDK1Q15118 436 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 PRKD1Q15139 912 aaPredicted RBP13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 DARS2Q6PI48 645 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 XKR5Q6UX68 686 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 RAB11FIP2Q7L804 512 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 KLHL7Q8IXQ5 586 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 KYQ8NBH2 561 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 GPR156Q8NFN8 814 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 MAGOHBQ96A72 148 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 CCDC74AQ96AQ1 378 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 TMEM159Q96B96 161 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 HDAC11Q96DB2 347 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 MED8Q96G25 268 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 CCNL2Q96S94 520 aaPredicted RBP13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 DDX47Q9H0S4 455 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 KCTD5Q9NXV2 234 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 SEPT10Q9P0V9 454 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 OR1A2Q9Y585 309 aa13.74□□□□□ -0.21
PDLIM2-213ENST00000448520 A0A1W2PQ67 120 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 B8ZZF3 427 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 D6RAR5 112 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 NVLO15381 856 aaKnown RBP13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 PHF2O75151 1096 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 PCCBP05166 539 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 RPLP0P05388 317 aaKnown RBP13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 SLC5A2P31639 672 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 UGT1A5P35504 534 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 TRIM23P36406 574 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 RENBPP51606 427 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 GDF10P55107 478 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 KIAA1024LP59773 190 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 BCL2L1Q07817 233 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 SLC10A7Q0GE19 358 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 ZBTB17Q13105 803 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 OASLQ15646 514 aaKnown RBP13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 CYP1B1Q16678 543 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 WHAMMP3Q1A5X7 153 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 LIPIQ6XZB0 460 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 TAF8Q7Z7C8 310 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 CCDC13Q8IYE1 715 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 PAF1Q8N7H5 531 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 TTC13Q8NBP0 860 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 TSEN2Q8NCE0 465 aaKnown RBP13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 OR56A4Q8NGH8 313 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 TFB1MQ8WVM0 346 aaKnown RBP13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 MAIP1Q8WWC4 291 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 ECHDC3Q96DC8 303 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 TMEM121Q9BTD3 319 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 CINPQ9BW66 212 aaPredicted RBP13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 EPB41L5Q9HCM4 733 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 RABGEF1Q9UJ41 708 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 ACSL6Q9UKU0 697 aa13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 ATXN7L1Q9ULK2 861 aaPredicted RBP13.73□□□□□ -0.21
PDLIM2-213ENST00000448520 ANKRD36A6QL64 1941 aa13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 A0A1W2PQM1 296 aa13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 F5H423 210 aaPredicted RBP13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 PPP1R12AO14974 1030 aaPredicted RBP13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 KCNN4O15554 427 aa13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 RECQL5O94762 991 aaPredicted RBP13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 ELFN1P0C7U0 828 aa13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 ETS1P14921 441 aa13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 MX2P20592 715 aa13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 NFKBIAP25963 317 aa13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 IL10RBQ08334 325 aa13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 XRCC4Q13426 336 aa13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 CCNG2Q16589 344 aa13.72□□□□□ -0.21
PDLIM2-213ENST00000448520 TMCO4Q5TGY1 634 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms