RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 CDKN2BP42772 138 aa17.6■□□□□ 0.41
DDX56-207ENST00000448192 SPINT3P49223 89 aa17.6■□□□□ 0.41
DDX56-207ENST00000448192 HADHBP55084 474 aaKnown RBP17.6■□□□□ 0.41
DDX56-207ENST00000448192 INHBCP55103 352 aa17.6■□□□□ 0.41
DDX56-207ENST00000448192 TLE3Q04726 772 aa17.6■□□□□ 0.41
DDX56-207ENST00000448192 BIRC2Q13490 618 aa17.6■□□□□ 0.41
DDX56-207ENST00000448192 PCSK7Q16549 785 aa17.6■□□□□ 0.41
DDX56-207ENST00000448192 SPOCD1Q6ZMY3 1216 aa17.6■□□□□ 0.41
DDX56-207ENST00000448192 CCDC170Q8IYT3 715 aa17.6■□□□□ 0.41
DDX56-207ENST00000448192 ARL14Q8N4G2 192 aa17.6■□□□□ 0.41
DDX56-207ENST00000448192 IMP4Q96G21 291 aaKnown RBP17.6■□□□□ 0.41
DDX56-207ENST00000448192 PRR11Q96HE9 360 aaPredicted RBP17.6■□□□□ 0.41
DDX56-207ENST00000448192 OR2M4Q96R27 311 aa17.6■□□□□ 0.41
DDX56-207ENST00000448192 STRADBQ9C0K7 418 aa17.6■□□□□ 0.41
DDX56-207ENST00000448192 BRD8Q9H0E9 1235 aa17.6■□□□□ 0.41
DDX56-207ENST00000448192 PKD2L2Q9NZM6 624 aa17.6■□□□□ 0.41
DDX56-207ENST00000448192 PCDHGA8Q9Y5G5 932 aa17.6■□□□□ 0.41
DDX56-207ENST00000448192 ST14Q9Y5Y6 855 aa17.6■□□□□ 0.41
DDX56-207ENST00000448192 RHPN2P1A8MT19 583 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 TMX2-CTNND1H3BSU7 103 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 AGRPO00253 132 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 CST8O60676 142 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 LCA5LO95447 670 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 ECEL1O95672 775 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 ATP1A1P05023 1023 aaKnown RBP17.59■□□□□ 0.41
DDX56-207ENST00000448192 PIRTP0C851 137 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 CYLC1P35663 651 aaPredicted RBP17.59■□□□□ 0.41
DDX56-207ENST00000448192 ACTR1BP42025 376 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 NR2C2P49116 596 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 ACTR1AP61163 376 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 PEX6Q13608 980 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 IGF2-ASQ6U949 168 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 BZW1Q7L1Q6 419 aaKnown RBP17.59■□□□□ 0.41
DDX56-207ENST00000448192 RAB11FIP2Q7L804 512 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 LYSMD3Q7Z3D4 306 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 GALNT13Q8IUC8 556 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 CCDC50Q8IVM0 306 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 RAVER1Q8IY67 606 aaKnown RBP17.59■□□□□ 0.41
DDX56-207ENST00000448192 SPATA22Q8NHS9 363 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 KCNE4Q8WWG9 221 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 PATE1Q8WXA2 126 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 SCARF2Q96GP6 870 aaPredicted RBP17.59■□□□□ 0.41
DDX56-207ENST00000448192 LIN37Q96GY3 246 aaPredicted RBP17.59■□□□□ 0.41
DDX56-207ENST00000448192 COX14Q96I36 57 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 TMEM74Q96NL1 305 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 WDR24Q96S15 920 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 SLC25A51Q9H1U9 297 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 FAM83DQ9H4H8 585 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 LUC7LQ9NQ29 371 aaKnown RBP17.59■□□□□ 0.41
DDX56-207ENST00000448192 ZNHIT2Q9UHR6 403 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 BPTFQ12830 3046 aa17.59■□□□□ 0.41
DDX56-207ENST00000448192 PLD2O14939 933 aa17.58■□□□□ 0.4
DDX56-207ENST00000448192 SLC4A1P02730 911 aa17.58■□□□□ 0.4
DDX56-207ENST00000448192 PECAM1P16284 738 aaPredicted RBP17.58■□□□□ 0.4
DDX56-207ENST00000448192 ALDH4A1P30038 563 aa17.58■□□□□ 0.4
DDX56-207ENST00000448192 ZNF75DP51815 510 aa17.58■□□□□ 0.4
DDX56-207ENST00000448192 PRKD1Q15139 912 aaPredicted RBP17.58■□□□□ 0.4
DDX56-207ENST00000448192 TAZQ16635 292 aa17.58■□□□□ 0.4
DDX56-207ENST00000448192 PYCR3Q53H96 274 aa17.58■□□□□ 0.4
DDX56-207ENST00000448192 TEX44Q53QW1 395 aa17.58■□□□□ 0.4
DDX56-207ENST00000448192 HENMT1Q5T8I9 393 aaKnown RBP17.58■□□□□ 0.4
DDX56-207ENST00000448192 FBXO39Q8N4B4 442 aa17.58■□□□□ 0.4
DDX56-207ENST00000448192 TFB1MQ8WVM0 346 aaKnown RBP17.58■□□□□ 0.4
DDX56-207ENST00000448192 FCRL3Q96P31 734 aaPredicted RBP17.58■□□□□ 0.4
DDX56-207ENST00000448192 TRIB3Q96RU7 358 aa17.58■□□□□ 0.4
DDX56-207ENST00000448192 PRORYQ9H606 182 aa17.58■□□□□ 0.4
DDX56-207ENST00000448192 ZFYVE1Q9HBF4 777 aa17.58■□□□□ 0.4
DDX56-207ENST00000448192 GLOD4Q9HC38 313 aa17.58■□□□□ 0.4
DDX56-207ENST00000448192 SHOC2Q9UQ13 582 aa17.58■□□□□ 0.4
DDX56-207ENST00000448192 PRKAB1Q9Y478 270 aa17.58■□□□□ 0.4
DDX56-207ENST00000448192 OAS3Q9Y6K5 1087 aaKnown RBP17.58■□□□□ 0.4
DDX56-207ENST00000448192 SCN8AQ9UQD0 1980 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 A0A0A6YYK5 440 aaPredicted RBP17.57■□□□□ 0.4
DDX56-207ENST00000448192 FADS2P1A8MWK0 482 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 KLK10O43240 276 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 B4GAT1O43505 415 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 PMPCBO75439 489 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 ZRANB2O95218 330 aaKnown RBP eCLIP17.57■□□□□ 0.4
DDX56-207ENST00000448192 MT-CYBP00156 380 aaPredicted RBP17.57■□□□□ 0.4
DDX56-207ENST00000448192 HGFP14210 728 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 PTPN3P26045 913 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 CCKBRP32239 447 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 MARCKSL1P49006 195 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 OR1D5P58170 312 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 CXADRP78310 365 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 B4GALNT1Q00973 533 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 CDK18Q07002 472 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 ADCY2Q08462 1091 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 EIF3IQ13347 325 aaKnown RBP17.57■□□□□ 0.4
DDX56-207ENST00000448192 AMZ1Q400G9 498 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 MAP9Q49MG5 647 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 SOWAHCQ53LP3 525 aaPredicted RBP17.57■□□□□ 0.4
DDX56-207ENST00000448192 TFDP3Q5H9I0 405 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 BROXQ5VW32 411 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 ALS2CLQ60I27 953 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 CCDC70Q6NSX1 233 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 C17orf82Q86X59 251 aaPredicted RBP17.57■□□□□ 0.4
DDX56-207ENST00000448192 KATNAL2Q8IYT4 538 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 RCOR2Q8IZ40 523 aa17.57■□□□□ 0.4
DDX56-207ENST00000448192 NAGSQ8N159 534 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms