RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 PRR35P0CG20 571 aa19.02■□□□□ 0.64
SDCBP-204ENST00000447182 CAPGP40121 348 aa19.02■□□□□ 0.64
SDCBP-204ENST00000447182 ENTPD1P49961 510 aa19.02■□□□□ 0.64
SDCBP-204ENST00000447182 RPS6KA2Q15349 733 aa19.02■□□□□ 0.64
SDCBP-204ENST00000447182 SPATA19Q7Z5L4 167 aa19.02■□□□□ 0.64
SDCBP-204ENST00000447182 TBC1D21Q8IYX1 336 aa19.02■□□□□ 0.64
SDCBP-204ENST00000447182 ARRDC2Q8TBH0 407 aa19.02■□□□□ 0.64
SDCBP-204ENST00000447182 TMEM209Q96SK2 561 aa19.02■□□□□ 0.64
SDCBP-204ENST00000447182 SMPD3Q9NY59 655 aaPredicted RBP19.02■□□□□ 0.64
SDCBP-204ENST00000447182 CDC14AQ9UNH5 594 aa19.02■□□□□ 0.64
SDCBP-204ENST00000447182 FADS3Q9Y5Q0 445 aa19.02■□□□□ 0.64
SDCBP-204ENST00000447182 OAS3Q9Y6K5 1087 aaKnown RBP19.02■□□□□ 0.64
SDCBP-204ENST00000447182 TYW5A2RUC4 315 aaKnown RBP19.01■□□□□ 0.63
SDCBP-204ENST00000447182 LRRC14BA6NHZ5 514 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 M0QZQ0 153 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 GLP2RO95838 553 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 SLC4A1P02730 911 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 RHOQP17081 205 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 CHRM3P20309 590 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 GSK3BP49841 420 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 MRPS6P82932 125 aaKnown RBP19.01■□□□□ 0.63
SDCBP-204ENST00000447182 LCP2Q13094 533 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 RCAN2Q14206 197 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 CYP51A1Q16850 503 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 MRNIPQ6NTE8 343 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 DUS1LQ6P1R4 473 aaKnown RBP19.01■□□□□ 0.63
SDCBP-204ENST00000447182 ELMSAN1Q6PJG2 1045 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 Q6ZNX1 250 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 ZNF354CQ86Y25 554 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 DHRSXQ8N5I4 330 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 CYGBQ8WWM9 190 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 TBATAQ96M53 351 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 NSUN5Q96P11 429 aaKnown RBP19.01■□□□□ 0.63
SDCBP-204ENST00000447182 KLHL5Q96PQ7 755 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 KCNA7Q96RP8 456 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 ALG2Q9H553 416 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 INTS10Q9NVR2 710 aaKnown RBP19.01■□□□□ 0.63
SDCBP-204ENST00000447182 TMEM248Q9NWD8 314 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 UXTQ9UBK9 157 aaPredicted RBP19.01■□□□□ 0.63
SDCBP-204ENST00000447182 ZNF639Q9UID6 485 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 KCTD3Q9Y597 815 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 ZFC3H1O60293 1989 aaKnown RBP19.01■□□□□ 0.63
SDCBP-204ENST00000447182 EI24O14681 340 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 CD3EAPO15446 510 aaKnown RBP19.01■□□□□ 0.63
SDCBP-204ENST00000447182 CLASP2O75122 1294 aaKnown RBP19.01■□□□□ 0.63
SDCBP-204ENST00000447182 HAPLN1P10915 354 aaPredicted RBP19.01■□□□□ 0.63
SDCBP-204ENST00000447182 VARSP26640 1264 aaKnown RBP19.01■□□□□ 0.63
SDCBP-204ENST00000447182 CYBRD1Q53TN4 286 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 USP51Q70EK9 711 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 RYBPQ8N488 228 aaPredicted RBP19.01■□□□□ 0.63
SDCBP-204ENST00000447182 ABTB1Q969K4 478 aaPredicted RBP19.01■□□□□ 0.63
SDCBP-204ENST00000447182 SLC39A13Q96H72 371 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 PLEKHG4BQ96PX9 1271 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 SEZ6LQ9BYH1 1024 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 RPF2Q9H7B2 306 aaKnown RBP19.01■□□□□ 0.63
SDCBP-204ENST00000447182 NMUR1Q9HB89 426 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 FAIMQ9NVQ4 179 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 TLR6Q9Y2C9 796 aa19.01■□□□□ 0.63
SDCBP-204ENST00000447182 CCL15-CCL14A0A0B4J2E2 113 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 C9JVG2 144 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 H3BMM5 538 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 INPP4BO15327 924 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 KERAO60938 352 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 EEDO75530 441 aaKnown RBP19■□□□□ 0.63
SDCBP-204ENST00000447182 B3GAT3O94766 335 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 GOT2P00505 430 aaKnown RBP19■□□□□ 0.63
SDCBP-204ENST00000447182 LINC00032P0C843 101 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 ZNF865P0CJ78 1059 aaPredicted RBP19■□□□□ 0.63
SDCBP-204ENST00000447182 IMPDH2P12268 514 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 OGNP20774 298 aaKnown RBP19■□□□□ 0.63
SDCBP-204ENST00000447182 BRCC3P46736 316 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 EEFSECP57772 596 aaKnown RBP19■□□□□ 0.63
SDCBP-204ENST00000447182 CLCQ05315 142 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 PMS2P3Q13401 168 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 CCL15Q16663 113 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 MSANTD2Q6P1R3 559 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 CD300LGQ6UXG3 332 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 MRPL10Q7Z7H8 261 aaKnown RBP19■□□□□ 0.63
SDCBP-204ENST00000447182 ANKRD23Q86SG2 305 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 ZNF554Q86TJ5 538 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 RBM12BQ8IXT5 1001 aaKnown RBP19■□□□□ 0.63
SDCBP-204ENST00000447182 PABPC5Q96DU9 382 aaKnown RBP19■□□□□ 0.63
SDCBP-204ENST00000447182 FBXL20Q96IG2 436 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 ZYG11BQ9C0D3 744 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 SP110Q9HB58 689 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 ANAPC2Q9UJX6 822 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 H3BMQ9 156 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 M0QZ92 97 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 SEC24DO94855 1032 aaPredicted RBP19■□□□□ 0.63
SDCBP-204ENST00000447182 ATE1O95260 518 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 HMOX2P30519 316 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 RPS9P46781 194 aaKnown RBP19■□□□□ 0.63
SDCBP-204ENST00000447182 ZFP36L2P47974 494 aaKnown RBP19■□□□□ 0.63
SDCBP-204ENST00000447182 NAA20P61599 178 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 NFYCQ13952 458 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 FXNQ16595 210 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 FAM110CQ1W6H9 321 aa19■□□□□ 0.63
SDCBP-204ENST00000447182 AASDHQ4L235 1098 aaPredicted RBP19■□□□□ 0.63
SDCBP-204ENST00000447182 USP50Q70EL3 339 aaPredicted RBP19■□□□□ 0.63
SDCBP-204ENST00000447182 TFAP2DQ7Z6R9 452 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms