RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 ARHGEF18Q6ZSZ5 1173 aa14.75□□□□□ -0.05
HDAC4-204ENST00000446876 MARK2Q7KZI7 788 aaKnown RBP14.75□□□□□ -0.05
HDAC4-204ENST00000446876 SFTPA2Q8IWL1 248 aa14.75□□□□□ -0.05
HDAC4-204ENST00000446876 REXO1L1PQ8IX06 675 aa14.75□□□□□ -0.05
HDAC4-204ENST00000446876 SLC35F3Q8IY50 421 aa14.75□□□□□ -0.05
HDAC4-204ENST00000446876 FSTL5Q8N475 847 aaPredicted RBP14.75□□□□□ -0.05
HDAC4-204ENST00000446876 TTC30BQ8N4P2 665 aa14.75□□□□□ -0.05
HDAC4-204ENST00000446876 BLOC1S5Q8TDH9 187 aa14.75□□□□□ -0.05
HDAC4-204ENST00000446876 DUSP23Q9BVJ7 150 aa14.75□□□□□ -0.05
HDAC4-204ENST00000446876 SPATA16Q9BXB7 569 aa14.75□□□□□ -0.05
HDAC4-204ENST00000446876 ARFGAP3Q9NP61 516 aa14.75□□□□□ -0.05
HDAC4-204ENST00000446876 TRMT1Q9NXH9 659 aaKnown RBP14.75□□□□□ -0.05
HDAC4-204ENST00000446876 CNOT6Q9ULM6 557 aaKnown RBP14.75□□□□□ -0.05
HDAC4-204ENST00000446876 SUFUQ9UMX1 484 aa14.75□□□□□ -0.05
HDAC4-204ENST00000446876 DOLKQ9UPQ8 538 aa14.75□□□□□ -0.05
HDAC4-204ENST00000446876 OAS3Q9Y6K5 1087 aaKnown RBP14.75□□□□□ -0.05
HDAC4-204ENST00000446876 ASXL3Q9C0F0 2248 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 ZNF106Q9H2Y7 1883 aaKnown RBP14.74□□□□□ -0.05
HDAC4-204ENST00000446876 PDE2AO00408 941 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-204ENST00000446876 TPP1O14773 563 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 METTL18O95568 372 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 EPOP01588 193 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 ATP1A1P05023 1023 aaKnown RBP14.74□□□□□ -0.05
HDAC4-204ENST00000446876 FGF1P05230 155 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 HLA-DPA1P20036 260 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 ACP1P24666 158 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 PRPSAP1Q14558 356 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 SIX1Q15475 284 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-204ENST00000446876 OASLQ15646 514 aaKnown RBP14.74□□□□□ -0.05
HDAC4-204ENST00000446876 KCTD19Q17RG1 926 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-204ENST00000446876 ZNF648Q5T619 568 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-204ENST00000446876 GUSBP11Q6P575 273 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 GLT6D1Q7Z4J2 308 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 TAF8Q7Z7C8 310 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 PRUNE1Q86TP1 453 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 NLRP8Q86W28 1048 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 FAM181AQ8N9Y4 354 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 KYQ8NBH2 561 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 ANP32BQ92688 251 aaKnown RBP14.74□□□□□ -0.05
HDAC4-204ENST00000446876 COX14Q96I36 57 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 HIC2Q96JB3 615 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 BOCQ9BWV1 1114 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 SLC17A4Q9Y2C5 497 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 PLEKHM1Q9Y4G2 1056 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 PCDHGA1Q9Y5H4 931 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 PCYT1BQ9Y5K3 369 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-204ENST00000446876 RP1P56715 2156 aa14.74□□□□□ -0.05
HDAC4-204ENST00000446876 CPED1A4D0V7 1026 aa14.73□□□□□ -0.05
HDAC4-204ENST00000446876 RGSL1A5PLK6 1076 aa14.73□□□□□ -0.05
HDAC4-204ENST00000446876 CEP104O60308 925 aa14.73□□□□□ -0.05
HDAC4-204ENST00000446876 ASMTLO95671 621 aa14.73□□□□□ -0.05
HDAC4-204ENST00000446876 FGGP02679 453 aa14.73□□□□□ -0.05
HDAC4-204ENST00000446876 PYGLP06737 847 aa14.73□□□□□ -0.05
HDAC4-204ENST00000446876 ETS1P14921 441 aa14.73□□□□□ -0.05
HDAC4-204ENST00000446876 AK4P27144 223 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-204ENST00000446876 PTPRCAPQ14761 206 aa14.73□□□□□ -0.05
HDAC4-204ENST00000446876 RANBP10Q6VN20 620 aa14.73□□□□□ -0.05
HDAC4-204ENST00000446876 GKN2Q86XP6 184 aa14.73□□□□□ -0.05
HDAC4-204ENST00000446876 RAVER1Q8IY67 606 aaKnown RBP14.73□□□□□ -0.05
HDAC4-204ENST00000446876 CNTNAP3BQ96NU0 1288 aa14.73□□□□□ -0.05
HDAC4-204ENST00000446876 TBL1YQ9BQ87 522 aa14.73□□□□□ -0.05
HDAC4-204ENST00000446876 CNTNAP3Q9BZ76 1288 aa14.73□□□□□ -0.05
HDAC4-204ENST00000446876 GULP1Q9UBP9 304 aa14.73□□□□□ -0.05
HDAC4-204ENST00000446876 GPR34Q9UPC5 381 aa14.73□□□□□ -0.05
HDAC4-204ENST00000446876 AAR2Q9Y312 384 aaKnown RBP14.73□□□□□ -0.05
HDAC4-204ENST00000446876 PRKAB1Q9Y478 270 aa14.73□□□□□ -0.05
HDAC4-204ENST00000446876 NEUROG3Q9Y4Z2 214 aa14.73□□□□□ -0.05
HDAC4-204ENST00000446876 ST14Q9Y5Y6 855 aa14.73□□□□□ -0.05
HDAC4-204ENST00000446876 COL27A1Q8IZC6 1860 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-204ENST00000446876 USP27XA6NNY8 438 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 C1QTNF9BB2RNN3 333 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 B4DGG1 531 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 CASC3O15234 703 aaKnown RBP14.72□□□□□ -0.05
HDAC4-204ENST00000446876 GPR39O43194 453 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 IFNB1P01574 187 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 IVLP07476 585 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 C1QTNF9P0C862 333 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 DCDC1P59894 354 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 NR0B2Q15466 257 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 SMAD1Q15797 465 aaKnown RBP14.72□□□□□ -0.05
HDAC4-204ENST00000446876 ZNF569Q5MCW4 686 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 PERM1Q5SV97 790 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 HES3Q5TGS1 186 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 DENND5AQ6IQ26 1287 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 TMPRSS7Q7RTY8 843 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 EFL1Q7Z2Z2 1120 aaKnown RBP14.72□□□□□ -0.05
HDAC4-204ENST00000446876 NRROSQ86YC3 692 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 KLHDC8BQ8IXV7 354 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 SLC35F6Q8N357 371 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 TRAM1L1Q8N609 369 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 GLIS1Q8NBF1 620 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 FAM46DQ8NEK8 389 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 IFI44Q8TCB0 444 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 UBE2Q2Q8WVN8 375 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 OR2M4Q96R27 311 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 SRPK1Q96SB4 655 aaKnown RBP14.72□□□□□ -0.05
HDAC4-204ENST00000446876 HACD3Q9P035 362 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 NFKBIL1Q9UBC1 381 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-204ENST00000446876 ZNF148Q9UQR1 794 aa14.72□□□□□ -0.05
HDAC4-204ENST00000446876 GPSM3Q9Y4H4 160 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms