RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 PTGIRP43119 386 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 NOMO1Q15155 1222 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 DLG2Q15700 870 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 NIPAL1Q6NVV3 410 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 PGBD3Q8N328 593 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 HAVCR1Q96D42 359 aa18.58■□□□□ 0.57
SHANK3-203ENST00000445220 ROBO3Q96MS0 1386 aa18.58■□□□□ 0.56
SHANK3-203ENST00000445220 GTF2E2P29084 291 aaKnown RBP18.58■□□□□ 0.56
SHANK3-203ENST00000445220 IDH3AP50213 366 aa18.58■□□□□ 0.56
SHANK3-203ENST00000445220 FNDC11Q9BVV2 318 aa18.58■□□□□ 0.56
SHANK3-203ENST00000445220 MRPL9Q9BYD2 267 aaKnown RBP18.58■□□□□ 0.56
SHANK3-203ENST00000445220 VWA7Q9Y334 891 aa18.58■□□□□ 0.56
SHANK3-203ENST00000445220 TCRBV7S2A1N4TA0A589 114 aa18.58■□□□□ 0.56
SHANK3-203ENST00000445220 TTPAP49638 278 aa18.58■□□□□ 0.56
SHANK3-203ENST00000445220 CYP4F8P98187 520 aa18.58■□□□□ 0.56
SHANK3-203ENST00000445220 SULT1C3Q6IMI6 304 aa18.58■□□□□ 0.56
SHANK3-203ENST00000445220 POTEHQ6S545 545 aa18.58■□□□□ 0.56
SHANK3-203ENST00000445220 AFTPHQ6ULP2 937 aa18.58■□□□□ 0.56
SHANK3-203ENST00000445220 PHACTR4Q8IZ21 702 aa18.58■□□□□ 0.56
SHANK3-203ENST00000445220 PJA1Q8NG27 643 aa18.58■□□□□ 0.56
SHANK3-203ENST00000445220 FCGR1BQ92637 280 aa18.58■□□□□ 0.56
SHANK3-203ENST00000445220 GFM1Q96RP9 751 aaKnown RBP18.58■□□□□ 0.56
SHANK3-203ENST00000445220 ALG2Q9H553 416 aa18.58■□□□□ 0.56
SHANK3-203ENST00000445220 ST3GAL5Q9UNP4 418 aa18.58■□□□□ 0.56
SHANK3-203ENST00000445220 BAZ2BQ9UIF8 2168 aaKnown RBP18.57■□□□□ 0.56
SHANK3-203ENST00000445220 PAPSS1O43252 624 aaPredicted RBP18.57■□□□□ 0.56
SHANK3-203ENST00000445220 IPO13O94829 963 aaKnown RBP18.57■□□□□ 0.56
SHANK3-203ENST00000445220 BMP7P18075 431 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 POLR2JP52435 117 aaKnown RBP18.57■□□□□ 0.56
SHANK3-203ENST00000445220 MTAPQ13126 283 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 PIK3R6Q5UE93 754 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 CHPFQ8IZ52 775 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 BANPQ8N9N5 519 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 TP53INP1Q96A56 240 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 PPM1MQ96MI6 270 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 S100A13Q99584 98 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 IRF2BPLQ9H1B7 796 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 GRHL1Q9NZI5 618 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 VPS51Q9UID3 782 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 POLR3HQ9Y535 204 aaPredicted RBP18.57■□□□□ 0.56
SHANK3-203ENST00000445220 M0QX08 132 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 SLC22A2O15244 555 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 OR5F1O95221 314 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 RPLP0P05388 317 aaKnown RBP18.57■□□□□ 0.56
SHANK3-203ENST00000445220 ENO2P09104 434 aaPredicted RBP18.57■□□□□ 0.56
SHANK3-203ENST00000445220 CREB1P16220 341 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 PAX3P23760 479 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 E2F2Q14209 437 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 USP43Q70EL4 1123 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 NLGN2Q8NFZ4 835 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 HASPINQ8TF76 798 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 LGMNQ99538 433 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 ZCCHC2Q9C0B9 1178 aaKnown RBP18.57■□□□□ 0.56
SHANK3-203ENST00000445220 CATP04040 527 aaKnown RBP18.57■□□□□ 0.56
SHANK3-203ENST00000445220 YES1P07947 543 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 PTPN3P26045 913 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 FASTKD3Q14CZ7 662 aaKnown RBP18.57■□□□□ 0.56
SHANK3-203ENST00000445220 GRIK5Q16478 980 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 LSM12Q3MHD2 195 aaKnown RBP18.57■□□□□ 0.56
SHANK3-203ENST00000445220 ZC3H12AQ5D1E8 599 aaKnown RBP18.57■□□□□ 0.56
SHANK3-203ENST00000445220 ARL13AQ5H913 290 aaPredicted RBP18.57■□□□□ 0.56
SHANK3-203ENST00000445220 VSTM1Q6UX27 236 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 CERS5Q8N5B7 392 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 HSFY1Q96LI6 401 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 HSD17B14Q9BPX1 270 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 YTHDF1Q9BYJ9 559 aaKnown RBP18.57■□□□□ 0.56
SHANK3-203ENST00000445220 PCDHB12Q9Y5F1 795 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 PRAMEF33A0A0G2JMD5 474 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 WWP2O00308 870 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 PLIN3O60664 434 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 PRAMEF10O60809 474 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 MAFO75444 373 aaPredicted RBP18.57■□□□□ 0.56
SHANK3-203ENST00000445220 PEX6Q13608 980 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 TMEM110Q86TL2 294 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 PCDHB18PQ96TA0 734 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 CASZ1Q86V15 1759 aa18.57■□□□□ 0.56
SHANK3-203ENST00000445220 A0A0X1KG70 313 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 TTLL13PA6NNM8 815 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 FAM25EA8MYX2 175 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 H3BSA7 217 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 PRMT5O14744 637 aaPredicted RBP18.56■□□□□ 0.56
SHANK3-203ENST00000445220 SLC30A4O14863 429 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 BNIP3Q12983 259 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 VPS26BQ4G0F5 336 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 UBE2E3Q969T4 207 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 TSPAN18Q96SJ8 248 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 COPS4Q9BT78 406 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 DSN1Q9H410 356 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 SNCAIPQ9Y6H5 919 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 ELOVL7A1L3X0 281 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 STX16-NPEPL1H3BU86 382 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 STX16O14662 325 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 CHST10O43529 356 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 SLC6A2P23975 617 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 CD86P42081 329 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 PTPRNQ16849 979 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 ZNF829Q3KNS6 432 aaPredicted RBP18.56■□□□□ 0.56
SHANK3-203ENST00000445220 RNASEH2BQ5TBB1 312 aaKnown RBP18.56■□□□□ 0.56
SHANK3-203ENST00000445220 ANXA8L1Q5VT79 327 aa18.56■□□□□ 0.56
SHANK3-203ENST00000445220 ZYG11AQ6WRX3 759 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms