RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 SCAMP1O15126 338 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 KCNAB3O43448 404 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 NDUFS3O75489 264 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 JRKO75564 520 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 GAGE7O76087 117 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 GFPT2O94808 682 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 GAGE12FP0CL80 117 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 GAGE12GP0CL81 117 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 GAGE12IP0CL82 117 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 PPARGP37231 505 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 GALCP54803 685 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 PRAMEP78395 509 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 GRIK2Q13002 908 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 GAGE1Q13065 139 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 GAGE4Q13068 117 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 IRF3Q14653 427 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 ADIPOQQ15848 244 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 KIAA0930Q6ICG6 404 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 ZNF280DQ6N043 979 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 CFAP161Q6P656 301 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 SLC36A4Q6YBV0 504 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 CHST9Q7L1S5 443 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 FASTKD5Q7L8L6 764 aaKnown RBP4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 RBM23Q86U06 439 aaKnown RBP4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 RNF168Q8IYW5 571 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 DSELQ8IZU8 1212 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 BEST3Q8N1M1 668 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 HJURPQ8NCD3 748 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 OR2AK2Q8NG84 335 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 POMGNT1Q8WZA1 660 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 GRAMD2BQ96HH9 432 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 MARK4Q96L34 752 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 OR2A14Q96R47 310 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 FIZ1Q96SL8 496 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 KXD1Q9BQD3 176 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 SDF4Q9BRK5 362 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 TBC1D29Q9UFV1 150 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 MTMR6Q9Y217 621 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 SNX9Q9Y5X1 595 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 CLIC4Q9Y696 253 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 EIF4G3O43432 1585 aaKnown RBP4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 LRRIQ1Q96JM4 1722 aa4.52□□□□□ -1.69
HMGB3P6-201ENST00000444896 KIAA0556O60303 1618 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 PTPN23Q9H3S7 1636 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 VILLO15195 856 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 CLDN14O95500 239 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 FCGR1AP12314 374 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 SRCP12931 536 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 GABRB1P18505 474 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 CDH8P55286 799 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 HNRNPH2P55795 449 aaKnown RBP4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 DSCR9P59020 149 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 SEC61A1P61619 476 aaKnown RBP4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 CREB5Q02930 508 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 KRTAP1-1Q07627 177 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 MYBPHQ13203 477 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 CRYMQ14894 314 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 OASLQ15646 514 aaKnown RBP4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 ASTE1Q2TB18 679 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 DUSP28Q4G0W2 176 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 WDR73Q6P4I2 378 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 PDXDC1Q6P996 788 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 RHBDF2Q6PJF5 856 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 CLEC4GQ6UXB4 293 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 CFAP77Q6ZQR2 320 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 TSPAN33Q86UF1 283 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 NRROSQ86YC3 692 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 SPATA2LQ8IUW3 424 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 SRBD1Q8N5C6 995 aaKnown RBP4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 SPATA22Q8NHS9 363 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 EGLN2Q96KS0 407 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 HIPK2Q9H2X6 1198 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 GAREM1Q9H706 876 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 SEBOXQ9HB31 216 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 SETD4Q9NVD3 440 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 HAUS2Q9NVX0 235 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 MTMR10Q9NXD2 777 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 C1RLQ9NZP8 487 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 ACSL5Q9ULC5 683 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 GPR34Q9UPC5 381 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 HFM1A2PYH4 1435 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 ARHGEF11O15085 1522 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 EPRSP07814 1512 aaKnown RBP4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 KIAA0586Q9BVV6 1533 aa4.51□□□□□ -1.69
HMGB3P6-201ENST00000444896 TCOF1Q13428 1488 aaKnown RBP4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 MAGI1Q96QZ7 1491 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 AKNAQ7Z591 1439 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 ATP2A1O14983 1001 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 SLC28A2O43868 658 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 GJB3O75712 270 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 KDM4BO94953 1096 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 PPP1R3DO95685 299 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 EGFP01133 1207 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 TGFB3P10600 412 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 ITGB6P18564 788 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 MCM3P25205 808 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 ACADLP28330 430 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 BDKRB2P30411 391 aa4.5□□□□□ -1.69
HMGB3P6-201ENST00000444896 HOXC9P31274 260 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms