RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 MRGPRX2Q96LB1 330 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 AGAP2Q99490 1192 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 GBA3Q9H227 469 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 TRABDQ9H4I3 376 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 C10orf88Q9H8K7 445 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 GULP1Q9UBP9 304 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 SUFUQ9UMX1 484 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 SHOC2Q9UQ13 582 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 CLCA2Q9UQC9 943 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 KCNN4O15554 427 aa18.52■□□□□ 0.56
CCDC188-202ENST00000444532 ANXA9O76027 345 aa18.52■□□□□ 0.56
CCDC188-202ENST00000444532 HLA-DPA1P20036 260 aa18.52■□□□□ 0.56
CCDC188-202ENST00000444532 GEMP55040 296 aa18.52■□□□□ 0.56
CCDC188-202ENST00000444532 DCDC1P59894 354 aa18.52■□□□□ 0.56
CCDC188-202ENST00000444532 TARDBPQ13148 414 aaKnown RBP eCLIP18.52■□□□□ 0.56
CCDC188-202ENST00000444532 KLF1Q13351 362 aaPredicted RBP18.52■□□□□ 0.56
CCDC188-202ENST00000444532 SIRPB2Q5JXA9 342 aa18.52■□□□□ 0.56
CCDC188-202ENST00000444532 ANKRD20A2Q5SQ80 823 aa18.52■□□□□ 0.56
CCDC188-202ENST00000444532 ANKRD20A1Q5TYW2 823 aa18.52■□□□□ 0.56
CCDC188-202ENST00000444532 ANKRD20A3Q5VUR7 823 aa18.52■□□□□ 0.56
CCDC188-202ENST00000444532 OGFOD3Q6PK18 319 aa18.52■□□□□ 0.56
CCDC188-202ENST00000444532 MARCH9Q86YJ5 346 aa18.52■□□□□ 0.56
CCDC188-202ENST00000444532 DCBLD1Q8N8Z6 715 aa18.52■□□□□ 0.56
CCDC188-202ENST00000444532 FAM46DQ8NEK8 389 aa18.52■□□□□ 0.56
CCDC188-202ENST00000444532 OR6C4Q8NGE1 309 aa18.52■□□□□ 0.56
CCDC188-202ENST00000444532 GSDMCQ9BYG8 508 aa18.52■□□□□ 0.56
CCDC188-202ENST00000444532 NFKBIL1Q9UBC1 381 aaPredicted RBP18.52■□□□□ 0.56
CCDC188-202ENST00000444532 TRABD2BA6NFA1 517 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 MT-CO3P00414 261 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 CAPNS1P04632 268 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 GNPDA1P46926 289 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 POLD2P49005 469 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 CLDN6P56747 220 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 ILF3Q12906 894 aaKnown RBP eCLIP18.51■□□□□ 0.55
CCDC188-202ENST00000444532 PEX6Q13608 980 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 SLC1A5Q15758 541 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 CDCP2Q5VXM1 449 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 KYQ8NBH2 561 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 GPR156Q8NFN8 814 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 IPMKQ8NFU5 416 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 MAPK15Q8TD08 544 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 PPP1R2P1Q96PQ5 205 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 FAM118BQ9BPY3 351 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 ZSCAN5AQ9BUG6 496 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 GRPEL1Q9HAV7 217 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 HACD3Q9P035 362 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 SIRPGQ9P1W8 387 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 VPS18Q9P253 973 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 CNOT6Q9ULM6 557 aaKnown RBP18.51■□□□□ 0.55
CCDC188-202ENST00000444532 TMEM98Q9Y2Y6 226 aa18.51■□□□□ 0.55
CCDC188-202ENST00000444532 AAR2Q9Y312 384 aaKnown RBP18.51■□□□□ 0.55
CCDC188-202ENST00000444532 MAP1BP46821 2468 aaKnown RBP18.51■□□□□ 0.55
CCDC188-202ENST00000444532 FADS2P1A8MWK0 482 aa18.5■□□□□ 0.55
CCDC188-202ENST00000444532 F5H423 210 aaPredicted RBP18.5■□□□□ 0.55
CCDC188-202ENST00000444532 INPP4BO15327 924 aa18.5■□□□□ 0.55
CCDC188-202ENST00000444532 HMGCLP35914 325 aa18.5■□□□□ 0.55
CCDC188-202ENST00000444532 ADCY8P40145 1251 aa18.5■□□□□ 0.55
CCDC188-202ENST00000444532 CCZ1BP86790 482 aa18.5■□□□□ 0.55
CCDC188-202ENST00000444532 CCZ1P86791 482 aaPredicted RBP18.5■□□□□ 0.55
CCDC188-202ENST00000444532 PRPSAP1Q14558 356 aa18.5■□□□□ 0.55
CCDC188-202ENST00000444532 PDPK2PQ6A1A2 396 aa18.5■□□□□ 0.55
CCDC188-202ENST00000444532 DOK6Q6PKX4 331 aa18.5■□□□□ 0.55
CCDC188-202ENST00000444532 SLC25A41Q8N5S1 370 aa18.5■□□□□ 0.55
CCDC188-202ENST00000444532 GPR26Q8NDV2 337 aa18.5■□□□□ 0.55
CCDC188-202ENST00000444532 CCL4L1Q8NHW4 92 aa18.5■□□□□ 0.55
CCDC188-202ENST00000444532 WDR48Q8TAF3 677 aa18.5■□□□□ 0.55
CCDC188-202ENST00000444532 ZCCHC14Q8WYQ9 949 aaKnown RBP18.5■□□□□ 0.55
CCDC188-202ENST00000444532 SPATA13Q96N96 652 aa18.5■□□□□ 0.55
CCDC188-202ENST00000444532 SPATA16Q9BXB7 569 aa18.5■□□□□ 0.55
CCDC188-202ENST00000444532 FSD1LQ9BXM9 530 aa18.5■□□□□ 0.55
CCDC188-202ENST00000444532 CCDC86Q9H6F5 360 aaKnown RBP18.5■□□□□ 0.55
CCDC188-202ENST00000444532 DKK4Q9UBT3 224 aa18.5■□□□□ 0.55
CCDC188-202ENST00000444532 SPO11Q9Y5K1 396 aa18.5■□□□□ 0.55
CCDC188-202ENST00000444532 KNTC1P50748 2209 aa18.5■□□□□ 0.55
CCDC188-202ENST00000444532 ASXL3Q9C0F0 2248 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 C5orf60A6NFR6 353 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 ASMTLO95671 621 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 FGF1P05230 155 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 PYCR3Q53H96 274 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 PERM1Q5SV97 790 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 SEL1L2Q5TEA6 688 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 MEI1Q5TIA1 1274 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 TRIM74Q86UV6 250 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 NRROSQ86YC3 692 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 TRAM1L1Q8N609 369 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 PTCD2Q8WV60 388 aaKnown RBP18.49■□□□□ 0.55
CCDC188-202ENST00000444532 PLEKHG4BQ96PX9 1271 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 ALS2CR12Q96Q35 445 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 DEPDC7Q96QD5 511 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 NRSN2Q9GZP1 204 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 DPEP2Q9H4A9 486 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 SUDS3Q9H7L9 328 aaPredicted RBP18.49■□□□□ 0.55
CCDC188-202ENST00000444532 RMI1Q9H9A7 625 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 LZTFL1Q9NQ48 299 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 ZMIZ1Q9ULJ6 1067 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 GPSM3Q9Y4H4 160 aa18.49■□□□□ 0.55
CCDC188-202ENST00000444532 SCN8AQ9UQD0 1980 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 GOLGA6L3A6NEY3 463 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 AURKAO14965 403 aa18.48■□□□□ 0.55
CCDC188-202ENST00000444532 NOBOXO60393 691 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms