RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 KIF17Q9P2E2 1029 aa11.61□□□□□ -0.55
HCFC1-203ENST00000444191 ACTL7AQ9Y615 435 aa11.61□□□□□ -0.55
HCFC1-203ENST00000444191 CEPT1Q9Y6K0 416 aa11.61□□□□□ -0.55
HCFC1-203ENST00000444191 PIRO00625 290 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 CXCL11O14625 94 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 NPHS1O60500 1241 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 HAPLN1P10915 354 aaPredicted RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 COL6A2P12110 1019 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 EFNA1P20827 205 aaPredicted RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 GSK3BP49841 420 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 AARS2Q5JTZ9 985 aaKnown RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 CPSF7Q8N684 471 aaKnown RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 LRRC58Q96CX6 371 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 FAM105AQ9NUU6 356 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 TMEM30AQ9NV96 361 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 SMPD4Q9NXE4 827 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 EIF2B4Q9UI10 523 aaKnown RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 PRSS51A0A1B0GVH4 220 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 A0A1W2PQ67 120 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 CCDC162PA2VCL2 907 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 PFDN6O15212 129 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 MATN3O15232 486 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 DEAF1O75398 565 aaPredicted RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 LRATO95237 230 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 FYNP06241 537 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 ZNF26P17031 533 aaPredicted RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 CAPN3P20807 821 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 GPR15P49685 360 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 RPL38P63173 70 aaKnown RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 CLCQ05315 142 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 PMS2P3Q13401 168 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 PGS1Q32NB8 556 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 KIAA0319Q5VV43 1072 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 TAF2Q6P1X5 1199 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 CYS1Q717R9 158 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 GLT6D1Q7Z4J2 308 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 RETREG3Q86VR2 466 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 ANKRD46Q86W74 232 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 ZC3H7AQ8IWR0 971 aaKnown RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 SLC15A3Q8IY34 581 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 CMTR2Q8IYT2 770 aaKnown RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 TOP6BLQ8N6T0 577 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 MUC3BQ9H195 1237 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 ZNF696Q9H7X3 374 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 SMURF2Q9HAU4 748 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 SUCOQ9UBS9 1254 aaKnown RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 PCDHGC4Q9Y5F7 938 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 SLC22A3O75751 556 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 SERPINF2P08697 491 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 ADSLP30566 484 aaPredicted RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 CD52P31358 61 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 CDK9P50750 372 aaKnown RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 DUSP28Q4G0W2 176 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 FAM98BQ52LJ0 330 aaKnown RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 PAQR9Q6ZVX9 377 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 HEATR4Q86WZ0 1026 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 TMEM102Q8N9M5 508 aaPredicted RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 CENPNQ96H22 339 aaPredicted RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 MUS81Q96NY9 551 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 GPR63Q9BZJ6 419 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 INTS7Q9NVH2 962 aaKnown RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 RIC8BQ9NVN3 520 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 SH3GLB1Q9Y371 365 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 POLR3HQ9Y535 204 aaPredicted RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 DNAJC15Q9Y5T4 150 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 ST14Q9Y5Y6 855 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 USP3Q9Y6I4 520 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 SLC30A1Q9Y6M5 507 aa11.6□□□□□ -0.55
HCFC1-203ENST00000444191 COL2A1P02458 1487 aaPredicted RBP11.6□□□□□ -0.55
HCFC1-203ENST00000444191 MICAL3Q7RTP6 2002 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 CST1P01037 141 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 PCYT1AP49585 367 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 CLK1P49759 484 aaKnown RBP11.59□□□□□ -0.55
HCFC1-203ENST00000444191 TAPT1Q6NXT6 567 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 DUS1LQ6P1R4 473 aaKnown RBP11.59□□□□□ -0.55
HCFC1-203ENST00000444191 GPR142Q7Z601 462 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 GPSM1Q86YR5 675 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 VPS45Q9NRW7 570 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 RASSF1Q9NS23 344 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 IFT80Q9P2H3 777 aaPredicted RBP11.59□□□□□ -0.55
HCFC1-203ENST00000444191 HSFX1Q9UBD0 423 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 AASSQ9UDR5 926 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 KLQ9UEF7 1012 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 VPS26AO75436 327 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 SBK3P0C264 359 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 CCNCP24863 283 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 PRDX3P30048 256 aaKnown RBP11.59□□□□□ -0.55
HCFC1-203ENST00000444191 MADCAM1Q13477 382 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 ARHGEF7Q14155 803 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 TECRLQ5HYJ1 363 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 PAGE2BQ5JRK9 111 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 HS3ST5Q8IZT8 346 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 LGI2Q8N0V4 545 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 STAG3L4Q8TBR4 150 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 MRGPRX2Q96LB1 330 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 ADAM2Q99965 735 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 CINPQ9BW66 212 aaPredicted RBP11.59□□□□□ -0.55
HCFC1-203ENST00000444191 HPS4Q9NQG7 708 aa11.59□□□□□ -0.55
HCFC1-203ENST00000444191 ADARB2Q9NS39 739 aaKnown RBP11.59□□□□□ -0.55
HCFC1-203ENST00000444191 MIOSQ9NXC5 875 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms