RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 TMEM168Q9H0V1 697 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 FGF22Q9HCT0 170 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 LUC7LQ9NQ29 371 aaKnown RBP7.75□□□□□ -1.17
CD44-211ENST00000442151 DDX56Q9NY93 547 aaKnown RBP7.75□□□□□ -1.17
CD44-211ENST00000442151 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.75□□□□□ -1.17
CD44-211ENST00000442151 TAAR2Q9P1P5 351 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 SLC17A4Q9Y2C5 497 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 LOXL2Q9Y4K0 774 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 ANKRD11Q6UB99 2663 aaPredicted RBP7.74□□□□□ -1.17
CD44-211ENST00000442151 PKD1L2Q7Z442 2459 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 A0A087X0T9 212 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 A0A0J9YYE9 177 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 J3QL48 77 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 PPP1R12AO14974 1030 aaPredicted RBP7.74□□□□□ -1.17
CD44-211ENST00000442151 MTSS1O43312 755 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 ZNF189O75820 626 aaPredicted RBP7.74□□□□□ -1.17
CD44-211ENST00000442151 PEX11BO96011 259 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 TRBC1P01850 177 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 PRKCGP05129 697 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 FGF1P05230 155 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 CEACAM5P06731 702 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 TMEM253P0C7T8 217 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 FAM228BP0C875 321 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 LIPCP11150 499 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 IL1R2P27930 398 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 SLC5A2P31639 672 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 HNRNPH3P31942 346 aaKnown RBP7.74□□□□□ -1.17
CD44-211ENST00000442151 PBX1P40424 430 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 SLC1A1P43005 524 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 SLC25A11Q02978 314 aaKnown RBP7.74□□□□□ -1.17
CD44-211ENST00000442151 TRAF2Q12933 501 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 NR1D2Q14995 579 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 PDK1Q15118 436 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 SLC18A3Q16572 532 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 HGSNATQ68CP4 663 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 PDPK2PQ6A1A2 396 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 CYB5D1Q6P9G0 228 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 TECPR1Q7Z6L1 1165 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 C17orf82Q86X59 251 aaPredicted RBP7.74□□□□□ -1.17
CD44-211ENST00000442151 AGBL5Q8NDL9 886 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 PIH1D2Q8WWB5 315 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 PDXPQ96GD0 296 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 SCARF2Q96GP6 870 aaPredicted RBP7.74□□□□□ -1.17
CD44-211ENST00000442151 PRR11Q96HE9 360 aaPredicted RBP7.74□□□□□ -1.17
CD44-211ENST00000442151 CCDC42Q96M95 316 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 TEFMQ96QE5 360 aaKnown RBP7.74□□□□□ -1.17
CD44-211ENST00000442151 OR2M4Q96R27 311 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 TAAR9Q96RI9 348 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 SLC38A3Q99624 504 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 ARHGAP9Q9BRR9 750 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 ZPBPQ9BS86 351 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 FUCA2Q9BTY2 467 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 ASPSCR1Q9BZE9 553 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 TRIM7Q9C029 511 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 ABCG8Q9H221 673 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 PCDH9Q9HC56 1237 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 IFNKQ9P0W0 207 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 VPS18Q9P253 973 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 PISDQ9UG56 409 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 RNF215Q9Y6U7 377 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 LAMA5O15230 3695 aa7.74□□□□□ -1.17
CD44-211ENST00000442151 A0A1W2PQM1 296 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 SYCE3A1L190 88 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 NOBOXO60393 691 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 KCNJ13O60928 360 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 ITGB2P05107 769 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 ALDH4A1P30038 563 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 ADCY8P40145 1251 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 ETV3P41162 512 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 NR2C2P49116 596 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 STC1P52823 247 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 RAB15P59190 212 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 MAXP61244 160 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 B4GALNT1Q00973 533 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 TFDP2Q14188 446 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 DPYSL3Q14195 570 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 SLC14A2Q15849 920 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 LRRC38Q5VT99 294 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 ZDHHC20Q5W0Z9 365 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 ALG1LQ6GMV1 187 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 Q6ZVL8 140 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 ZNF438Q7Z4V0 828 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 HSD11B1LQ7Z5J1 315 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 SLC9B2Q86UD5 537 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 LUZP1Q86V48 1076 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 OR4D9Q8NGE8 314 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 LRRC45Q96CN5 670 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 HDAC11Q96DB2 347 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 SGF29Q96ES7 293 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 MED8Q96G25 268 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 LYSMD1Q96S90 227 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 HERPUD2Q9BSE4 406 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 FAM83DQ9H4H8 585 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 MRPL40Q9NQ50 206 aaKnown RBP7.73□□□□□ -1.17
CD44-211ENST00000442151 KCNK4Q9NYG8 393 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 INTUQ9ULD6 942 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 SUFUQ9UMX1 484 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 TTLL3Q9Y4R7 772 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 KIR2DS5A0A0G2JLQ3 304 aa7.73□□□□□ -1.17
CD44-211ENST00000442151 A0A0G2JNG1 304 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms