RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 TREX1Q9NSU2 369 aa16.01■□□□□ 0.15
UBE2F-214ENST00000440223 LGALS13Q9UHV8 139 aa16.01■□□□□ 0.15
UBE2F-214ENST00000440223 SARDHQ9UL12 918 aa16.01■□□□□ 0.15
UBE2F-214ENST00000440223 PKP3Q9Y446 797 aa16.01■□□□□ 0.15
UBE2F-214ENST00000440223 NUMA1Q14980 2115 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 IQANK1A0A1B0GTG1 560 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 ZCWPW2A0A1B0GU75 182 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 FAM47DPA6NHR8 397 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 UPK3BL1B0FP48 263 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 UPK3BL2E5RIL1 263 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 LDB2O43679 373 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 FSBPO95073 299 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 SLC4A1P02730 911 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 CFIP05156 583 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 CTSLP07711 333 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 CTPS1P17812 591 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 SDHBP21912 280 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 ABL2P42684 1182 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 SUOXP51687 545 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 ILF2Q12905 390 aaKnown RBP16■□□□□ 0.15
UBE2F-214ENST00000440223 TMED2Q15363 201 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 UGP2Q16851 508 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 POM121L1PQ3SYA9 428 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 TRIM61Q5EBN2 209 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 KIAA0895LQ68EN5 471 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 TCEAL6Q6IPX3 200 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 ESRP1Q6NXG1 681 aaKnown RBP16■□□□□ 0.15
UBE2F-214ENST00000440223 ERAP2Q6P179 960 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 TRMT10BQ6PF06 316 aaKnown RBP16■□□□□ 0.15
UBE2F-214ENST00000440223 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16■□□□□ 0.15
UBE2F-214ENST00000440223 OR14C36Q8NHC7 312 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 NETO1Q8TDF5 533 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 SLC44A1Q8WWI5 657 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 DNASE2BQ8WZ79 361 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 TCEAL3Q969E4 200 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 FAM131CQ96AQ9 280 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 MRRFQ96E11 262 aaKnown RBP16■□□□□ 0.15
UBE2F-214ENST00000440223 ATP6V1G3Q96LB4 118 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 FCRL3Q96P31 734 aaPredicted RBP16■□□□□ 0.15
UBE2F-214ENST00000440223 LYSMD1Q96S90 227 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 C19orf43Q9BQ61 176 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 TRIM56Q9BRZ2 755 aaKnown RBP16■□□□□ 0.15
UBE2F-214ENST00000440223 TMEM74BQ9NUR3 256 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 ZBTB32Q9Y2Y4 487 aaPredicted RBP16■□□□□ 0.15
UBE2F-214ENST00000440223 SPO11Q9Y5K1 396 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 GVINP1Q7Z2Y8 2422 aa16■□□□□ 0.15
UBE2F-214ENST00000440223 PTPRZ1P23471 2315 aaPredicted RBP16■□□□□ 0.15
UBE2F-214ENST00000440223 LRRK1Q38SD2 2015 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 C1orf232A0A0U1RR37 186 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 PATE3B3GLJ2 98 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 PLRG1O43660 514 aaKnown RBP15.99■□□□□ 0.15
UBE2F-214ENST00000440223 KRT37O76014 449 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 KRT38O76015 456 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 VAPBO95292 243 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 PRKCGP05129 697 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 ITGB7P26010 798 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 CNTFP26441 200 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 ZNF140P52738 457 aaPredicted RBP15.99■□□□□ 0.15
UBE2F-214ENST00000440223 METAP1P53582 386 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 CNTN1Q12860 1018 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 MSLNQ13421 630 aaPredicted RBP15.99■□□□□ 0.15
UBE2F-214ENST00000440223 ARHGEF7Q14155 803 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 EFTUD2Q15029 972 aaKnown RBP eCLIP15.99■□□□□ 0.158e-7■■■■□ 19.8
UBE2F-214ENST00000440223 CNGA3Q16281 694 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 AGBL4Q5VU57 503 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 SLC23A3Q6PIS1 610 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 AFTPHQ6ULP2 937 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 KRT222Q8N1A0 295 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 OR6P1Q8NGX9 317 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.99■□□□□ 0.15
UBE2F-214ENST00000440223 SCRN2Q96FV2 425 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 DNAJC1Q96KC8 554 aaKnown RBP15.99■□□□□ 0.15
UBE2F-214ENST00000440223 CPNE1Q99829 537 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 EDEM2Q9BV94 578 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 MIR1-1HGQ9H1L0 117 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 ZFYVE1Q9HBF4 777 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 PLAC1Q9HBJ0 212 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 IARS2Q9NSE4 1012 aaKnown RBP15.99■□□□□ 0.15
UBE2F-214ENST00000440223 NLE1Q9NVX2 485 aaPredicted RBP15.99■□□□□ 0.15
UBE2F-214ENST00000440223 ZNF180Q9UJW8 692 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 CDV3Q9UKY7 258 aaKnown RBP15.99■□□□□ 0.15
UBE2F-214ENST00000440223 SLC6A14Q9UN76 642 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 PPIL1Q9Y3C6 166 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 ARL5AQ9Y689 179 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 ZNF292O60281 2723 aa15.99■□□□□ 0.15
UBE2F-214ENST00000440223 A0A1B0GTW7 788 aa15.98■□□□□ 0.15
UBE2F-214ENST00000440223 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.98■□□□□ 0.15
UBE2F-214ENST00000440223 LNP1A1A4G5 178 aa15.98■□□□□ 0.15
UBE2F-214ENST00000440223 PFDN6O15212 129 aa15.98■□□□□ 0.15
UBE2F-214ENST00000440223 ALPIP09923 528 aa15.98■□□□□ 0.15
UBE2F-214ENST00000440223 ERVK-10P10266 1014 aa15.98■□□□□ 0.15
UBE2F-214ENST00000440223 ZNF30P17039 623 aa15.98■□□□□ 0.15
UBE2F-214ENST00000440223 KRT15P19012 456 aa15.98■□□□□ 0.15
UBE2F-214ENST00000440223 MAOBP27338 520 aa15.98■□□□□ 0.15
UBE2F-214ENST00000440223 VIPR1P32241 457 aa15.98■□□□□ 0.15
UBE2F-214ENST00000440223 GP5P40197 560 aa15.98■□□□□ 0.15
UBE2F-214ENST00000440223 NEK3P51956 506 aa15.98■□□□□ 0.15
UBE2F-214ENST00000440223 CSE1LP55060 971 aaKnown RBP15.98■□□□□ 0.15
UBE2F-214ENST00000440223 ACVR1Q04771 509 aa15.98■□□□□ 0.15
UBE2F-214ENST00000440223 ELP6Q0PNE2 266 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms