RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 HEY1Q9Y5J3 304 aa4.77□□□□□ -1.65
EDEM3-203ENST00000439962 PIEZO2Q9H5I5 2752 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 A0A1W2PQF6 199 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 E9PAM4 449 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 NDUFS2O75306 463 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 CIB2O75838 187 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 PENKP01210 267 aaPredicted RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 PROCP04070 461 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 RHOCP08134 193 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 MYL2P10916 166 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 BGNP21810 368 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 CCNCP24863 283 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 SH3BGRP55822 239 aaPredicted RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 GBE1Q04446 702 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 SLC34A1Q06495 639 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 BST1Q10588 318 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 EIF4EBP2Q13542 120 aaPredicted RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 LAMB3Q13751 1172 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 BLMHQ13867 455 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 HERC3Q15034 1050 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 AASDHQ4L235 1098 aaPredicted RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 USP39Q53GS9 565 aaKnown RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 PDPK2PQ6A1A2 396 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 IRGCQ6NXR0 463 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 KIAA0408Q6ZU52 694 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 PRPF39Q86UA1 669 aaKnown RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 ADIPOR2Q86V24 386 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 UNC5BQ8IZJ1 945 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 NDUFAF2Q8N183 169 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 STK40Q8N2I9 435 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 OR14C36Q8NHC7 312 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 RFWD2Q8NHY2 731 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 PIP4K2CQ8TBX8 421 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 NSMCE1Q8WV22 266 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 UCMAQ8WVF2 138 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 PEX13Q92968 403 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 MCUR1Q96AQ8 359 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 TOE1Q96GM8 510 aaKnown RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 CNDP1Q96KN2 507 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 MRGPRX1Q96LB2 322 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 NUDCD1Q96RS6 583 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 RANBP9Q96S59 729 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 CADM1Q9BY67 442 aaKnown RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 CEP41Q9BYV8 373 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 FZD3Q9NPG1 666 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 ZSCAN32Q9NX65 697 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 EBF1Q9UH73 591 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 EIF2B4Q9UI10 523 aaKnown RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 SOX13Q9UN79 622 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 FNDC3AQ9Y2H6 1198 aaKnown RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 LRCH1Q9Y2L9 728 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 HMX2A2RU54 273 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 MID1O15344 667 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 MFSD11O43934 449 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 ATG13O75143 517 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 BANF1O75531 89 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 ANXA9O76027 345 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 LRIG2O94898 1065 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 APBB3O95704 486 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 IGLV3-25P01717 112 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 SLC4A1P02730 911 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 ITGA2BP08514 1039 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 CISD3P0C7P0 127 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 GOT1P17174 413 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 SERPINB3P29508 390 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 SLC26A3P40879 764 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 ATXN3P54252 364 aaPredicted RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 AP1B1Q10567 949 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 DLG2Q15700 870 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 CHI3L2Q15782 390 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 PITRM1Q5JRX3 1037 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 ATXN7L2Q5T6C5 722 aaPredicted RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 IRAK1BP1Q5VVH5 260 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 ZNF687Q8N1G0 1237 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 TAB3Q8N5C8 712 aaPredicted RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 HJURPQ8NCD3 748 aaPredicted RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 PPFIBP2Q8ND30 876 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 SPOCK2Q92563 424 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 PTPRN2Q92932 1015 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 STMN2Q93045 179 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 CMTM5Q96DZ9 223 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 NAF1Q96HR8 494 aaKnown RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 CEP295NLQ96MC4 621 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 NR1H4Q96RI1 486 aaPredicted RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 OMDQ99983 421 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 KIFC1Q9BW19 673 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 ZDHHC6Q9H6R6 413 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 ATP13A1Q9HD20 1204 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 MRPL40Q9NQ50 206 aaKnown RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 SMYD2Q9NRG4 433 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 SPATS2LQ9NUQ6 558 aaKnown RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 ARHGEF38Q9NXL2 777 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 ZMYM5Q9UJ78 669 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 MMP17Q9ULZ9 603 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 PRPF19Q9UMS4 504 aaKnown RBP4.76□□□□□ -1.65
EDEM3-203ENST00000439962 TRIM33Q9UPN9 1127 aa4.76□□□□□ -1.65
EDEM3-203ENST00000439962 TBC1D3DA0A087WVF3 549 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TBC1D3IA0A087WXS9 549 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms