RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 FXYD1O00168 92 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 AKAP10O43572 662 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 MATN4O95460 622 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 SLC2A3P11169 496 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 CDK4P11802 303 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 NELFEP18615 380 aaKnown RBP16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 PAX3P23760 479 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 TLE2Q04725 743 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 BNIP2Q12982 314 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 TRIM60Q495X7 471 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 CLLU1OSQ5K130 101 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 INTS11Q5TA45 600 aaKnown RBP16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 LCN8Q6JVE9 175 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 GLB1LQ6UWU2 654 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 ANKRD33Q7Z3H0 272 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 MIER2Q8N344 545 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 GOLM1Q8NBJ4 401 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 OR52K2Q8NGK3 314 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 GPR150Q8NGU9 434 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 EXT2Q93063 718 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 PABPC5Q96DU9 382 aaKnown RBP16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 SCLYQ96I15 445 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 ZYG11BQ9C0D3 744 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 POPDC3Q9HBV1 291 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 UXTQ9UBK9 157 aaPredicted RBP16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 CRYL1Q9Y2S2 319 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 PLXNA3P51805 1871 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 AZIN1O14977 448 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 PIP5K1BO14986 540 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 BMP10O95393 424 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 SLC4A1P02730 911 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 CCL23P55773 120 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 TUSC3Q13454 348 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 OR4D1Q15615 310 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 KCTD21Q4G0X4 260 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 EPHX4Q8IUS5 362 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 SLC15A3Q8IY34 581 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 PGBD5Q8N414 524 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 GRIN3AQ8TCU5 1115 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 TRPC4APQ8TEL6 797 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 TMIGD2Q96BF3 282 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 SUSD3Q96L08 255 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 CYP2S1Q96SQ9 504 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 HIPK3Q9H422 1215 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 CLK4Q9HAZ1 481 aaKnown RBP16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 MID1IP1Q9NPA3 183 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 GIMAP2Q9UG22 337 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 SLC8A2Q9UPR5 921 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 PTGDR2Q9Y5Y4 395 aa16.35■□□□□ 0.21
CLCNKA-203ENST00000439316 TTC3P53804 2025 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 DHRS12A0PJE2 317 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 TRIM64CA6NLI5 447 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 PPP6CO00743 305 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 DLGAP1O14490 977 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 ENPP3O14638 875 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 INPPL1O15357 1258 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 HNRNPRO43390 633 aaKnown RBP16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 CNTN5O94779 1100 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 SIX3O95343 332 aaPredicted RBP16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 ITGB1P05556 798 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 MTHFD2P13995 350 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 ZNF37AP17032 561 aaPredicted RBP16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 TYMPP19971 482 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 GRB7Q14451 532 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 INPP5AQ14642 412 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 VPS26BQ4G0F5 336 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 ALFQ53S48 1182 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 COQ5Q5HYK3 327 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 MS4A13Q5J8X5 152 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 TBCELQ5QJ74 424 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 RAB44Q7Z6P3 723 aaPredicted RBP16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 FAM47BQ8NA70 645 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 RHEBL1Q8TAI7 183 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 GAB3Q8WWW8 586 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 PEX13Q92968 403 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 PSMG2Q969U7 264 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 TBATAQ96M53 351 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 TUBB1Q9H4B7 451 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 SDR39U1Q9NRG7 319 aaPredicted RBP16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 AGPAT4Q9NRZ5 378 aa16.34■□□□□ 0.21
CLCNKA-203ENST00000439316 IGLV3-10A0A075B6K4 115 aa16.33■□□□□ 0.21
CLCNKA-203ENST00000439316 TTC24A2A3L6 582 aaPredicted RBP16.33■□□□□ 0.21
CLCNKA-203ENST00000439316 SAC3D1A6NKF1 404 aa16.33■□□□□ 0.21
CLCNKA-203ENST00000439316 UBXN8O00124 270 aa16.33■□□□□ 0.21
CLCNKA-203ENST00000439316 ANGPT2O15123 496 aa16.33■□□□□ 0.21
CLCNKA-203ENST00000439316 GOT2P00505 430 aaKnown RBP16.33■□□□□ 0.21
CLCNKA-203ENST00000439316 FOXA1P55317 472 aa16.33■□□□□ 0.21
CLCNKA-203ENST00000439316 NME5P56597 212 aa16.33■□□□□ 0.21
CLCNKA-203ENST00000439316 FOXM1Q08050 763 aa16.33■□□□□ 0.21
CLCNKA-203ENST00000439316 TCTN1Q2MV58 587 aa16.33■□□□□ 0.21
CLCNKA-203ENST00000439316 SPATS1Q496A3 300 aa16.33■□□□□ 0.21
CLCNKA-203ENST00000439316 ERI1Q8IV48 349 aaKnown RBP16.33■□□□□ 0.21
CLCNKA-203ENST00000439316 FEM1CQ96JP0 617 aa16.33■□□□□ 0.21
CLCNKA-203ENST00000439316 SLC45A3Q96JT2 553 aa16.33■□□□□ 0.21
CLCNKA-203ENST00000439316 UROC1Q96N76 676 aa16.33■□□□□ 0.21
CLCNKA-203ENST00000439316 ATOH8Q96SQ7 321 aa16.33■□□□□ 0.21
CLCNKA-203ENST00000439316 IL1RL2Q9HB29 575 aa16.33■□□□□ 0.21
CLCNKA-203ENST00000439316 CMTM6Q9NX76 183 aa16.33■□□□□ 0.21
CLCNKA-203ENST00000439316 SCML2Q9UQR0 700 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms