RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 ABHD10Q9NUJ1 306 aa18.36■□□□□ 0.53
AC004540.1-201ENST00000439120 UNC13CQ8NB66 2214 aa18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 KCNK1O00180 336 aa18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 CLDN7O95471 211 aa18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 SOD1P00441 154 aa18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 CD86P42081 329 aa18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 ARHGAP25P42331 645 aa18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 MAPK10P53779 464 aa18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 B4GALNT1Q00973 533 aa18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 PPIDQ08752 370 aaKnown RBP18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 NIPAL4Q0D2K0 466 aa18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 AP1B1Q10567 949 aa18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 SLC10A2Q12908 348 aaPredicted RBP18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 CLN3Q13286 438 aa18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 ASTE1Q2TB18 679 aaPredicted RBP18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 NLRP8Q86W28 1048 aa18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 RHOT2Q8IXI1 618 aa18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 RAVER1Q8IY67 606 aaKnown RBP18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 CCNL2Q96S94 520 aaPredicted RBP18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 MLPHQ9BV36 600 aaPredicted RBP18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 PKD2L2Q9NZM6 624 aa18.35■□□□□ 0.53
AC004540.1-201ENST00000439120 APOL1O14791 398 aa18.34■□□□□ 0.53
AC004540.1-201ENST00000439120 KRT1P04264 644 aa18.34■□□□□ 0.53
AC004540.1-201ENST00000439120 ITIH1P19827 911 aa18.34■□□□□ 0.53
AC004540.1-201ENST00000439120 GPR3P46089 330 aa18.34■□□□□ 0.53
AC004540.1-201ENST00000439120 LRP8Q14114 963 aa18.34■□□□□ 0.53
AC004540.1-201ENST00000439120 USP53Q70EK8 1073 aa18.34■□□□□ 0.53
AC004540.1-201ENST00000439120 ZNF438Q7Z4V0 828 aa18.34■□□□□ 0.53
AC004540.1-201ENST00000439120 C17orf82Q86X59 251 aaPredicted RBP18.34■□□□□ 0.53
AC004540.1-201ENST00000439120 SLITRK4Q8IW52 837 aa18.34■□□□□ 0.53
AC004540.1-201ENST00000439120 PATE1Q8WXA2 126 aa18.34■□□□□ 0.53
AC004540.1-201ENST00000439120 AGAP2Q99490 1192 aa18.34■□□□□ 0.53
AC004540.1-201ENST00000439120 SEMA6CQ9H3T2 930 aa18.34■□□□□ 0.53
AC004540.1-201ENST00000439120 TSPY26PQ9H489 355 aa18.34■□□□□ 0.53
AC004540.1-201ENST00000439120 NHEJ1Q9H9Q4 299 aaPredicted RBP18.34■□□□□ 0.53
AC004540.1-201ENST00000439120 SPTLC3Q9NUV7 552 aa18.34■□□□□ 0.53
AC004540.1-201ENST00000439120 SEPT10Q9P0V9 454 aa18.34■□□□□ 0.53
AC004540.1-201ENST00000439120 ZNHIT2Q9UHR6 403 aa18.34■□□□□ 0.53
AC004540.1-201ENST00000439120 ZNF487B1APH4 448 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 K7ENP7 123 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 PPP1R12AO14974 1030 aaPredicted RBP18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 NVLO15381 856 aaKnown RBP18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 B4GAT1O43505 415 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 MFAP3LO75121 409 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 PRLP01236 227 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 ZFXP17010 805 aaPredicted RBP18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 IFI35P80217 286 aaPredicted RBP18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 IHHQ14623 411 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 NR1D2Q14995 579 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 PDK1Q15118 436 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 CLPPQ16740 277 aaPredicted RBP18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 PYCR3Q53H96 274 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 TMEM164Q5U3C3 297 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 INO80CQ6PI98 192 aaPredicted RBP18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 TMPRSS9Q7Z410 1059 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 RFX6Q8HWS3 928 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 VSTM4Q8IW00 320 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 NAGSQ8N159 534 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 PLD5Q8N7P1 536 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 SCARF2Q96GP6 870 aaPredicted RBP18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 LYSMD1Q96S90 227 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 CHP1Q99653 195 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 NUDT22Q9BRQ3 303 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 SSUH2Q9Y2M2 353 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 PLEKHM1Q9Y4G2 1056 aa18.33■□□□□ 0.52
AC004540.1-201ENST00000439120 SCN8AQ9UQD0 1980 aa18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 ANKRD66B4E2M5 251 aa18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 TNNT1P13805 278 aa18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 SPINT3P49223 89 aa18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 CFHR1Q03591 330 aa18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 ZBTB17Q13105 803 aa18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 QPCTQ16769 361 aa18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 VSIG1Q86XK7 387 aa18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 SNRNP27Q8WVK2 155 aaKnown RBP18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 WBP1Q96G27 269 aa18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 AHCYL2Q96HN2 611 aaKnown RBP18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 COX14Q96I36 57 aa18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 FAM83DQ9H4H8 585 aa18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 STN1Q9H668 368 aaKnown RBP18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 DDX56Q9NY93 547 aaKnown RBP18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 KCNK4Q9NYG8 393 aa18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 VPS18Q9P253 973 aa18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 ACSL6Q9UKU0 697 aa18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 PCDHB11Q9Y5F2 797 aa18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 ST14Q9Y5Y6 855 aa18.32■□□□□ 0.52
AC004540.1-201ENST00000439120 PRAMEF33A0A0G2JMD5 474 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 RGSL1A5PLK6 1076 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 PPM1DO15297 605 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 SPOPO43791 374 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 PRAMEF10O60809 474 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 ATP1A1P05023 1023 aaKnown RBP18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 MMP2P08253 660 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 LIPCP11150 499 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 DYNLT1P63172 113 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 GALNT3Q14435 633 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 SLC9A4Q6AI14 798 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 CHST15Q7LFX5 561 aaPredicted RBP18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 KDELC2Q7Z4H8 507 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 NT5DC3Q86UY8 548 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 CNGA4Q8IV77 575 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms