RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 ZNF641Q96N77 438 aaPredicted RBP11.11□□□□□ -0.63
CSTF3-203ENST00000438862 NCAPGQ9BPX3 1015 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 PADI1Q9ULC6 663 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 ATP8A1Q9Y2Q0 1164 aa11.11□□□□□ -0.63
CSTF3-203ENST00000438862 GOLGA6L3A6NEY3 463 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 C21orf140B9A014 251 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 TEX33O43247 280 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 BUB1O43683 1085 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 TMCC1O94876 653 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 MT-ND3P03897 115 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 FUCA1P04066 466 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 CEACAM5P06731 702 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 CASP14P31944 242 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 GARSP41250 739 aaKnown RBP11.1□□□□□ -0.63
CSTF3-203ENST00000438862 GNPDA1P46926 289 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 PER3P56645 1201 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 DNASE1L3Q13609 305 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 IL11RAQ14626 422 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 KRT31Q15323 416 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 SLC25A52Q3SY17 297 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 VWA3BQ502W6 1294 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 CFAP58Q5T655 872 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 LIPIQ6XZB0 460 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 LEKR1Q6ZMV7 388 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 APTXQ7Z2E3 356 aaKnown RBP11.1□□□□□ -0.63
CSTF3-203ENST00000438862 ARHGEF19Q8IW93 802 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 NCSTNQ92542 709 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 KREMEN1Q96MU8 473 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 PHPT1Q9NRX4 125 aaPredicted RBP11.1□□□□□ -0.63
CSTF3-203ENST00000438862 NDFIP2Q9NV92 336 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 KCTD5Q9NXV2 234 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 G3BP2Q9UN86 482 aaKnown RBP11.1□□□□□ -0.63
CSTF3-203ENST00000438862 CSMD2Q7Z408 3487 aa11.1□□□□□ -0.63
CSTF3-203ENST00000438862 A0A1B0GTH6 734 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 FAM181BA6NEQ2 426 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 CBFA2T2O43439 604 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 BUB1BO60566 1050 aaPredicted RBP11.09□□□□□ -0.63
CSTF3-203ENST00000438862 RAMP2O60895 175 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 SERPINC1P01008 464 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 ANKRD34CP0C6C1 535 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 ELFN1P0C7U0 828 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 ZNF28P17035 718 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 RHOQP17081 205 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 TFE3P19532 575 aaPredicted RBP11.09□□□□□ -0.63
CSTF3-203ENST00000438862 ITGA3P26006 1051 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 ACTR1BP42025 376 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 RNASE9P60153 205 aaKnown RBP11.09□□□□□ -0.63
CSTF3-203ENST00000438862 ACTR1AP61163 376 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 FANCCQ00597 558 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 FOXM1Q08050 763 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 UGT8Q16880 541 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 SLC6A19Q695T7 634 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 DESI1Q6ICB0 168 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 MRPL14Q6P1L8 145 aaKnown RBP11.09□□□□□ -0.63
CSTF3-203ENST00000438862 DNAAF5Q86Y56 855 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 RASGRP3Q8IV61 690 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 IQCKQ8N0W5 287 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 SH3KBP1Q96B97 665 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 SNRNP40Q96DI7 357 aaKnown RBP11.09□□□□□ -0.63
CSTF3-203ENST00000438862 C19orf60Q96EN9 201 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 TBCBQ99426 244 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 TEX101Q9BY14 249 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 GPR87Q9BY21 358 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 FRMD8Q9BZ67 464 aaPredicted RBP11.09□□□□□ -0.63
CSTF3-203ENST00000438862 ING2Q9H160 280 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 NDST4Q9H3R1 872 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 EPB41L1Q9H4G0 881 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 SYNCQ9H7C4 482 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 SUDS3Q9H7L9 328 aaPredicted RBP11.09□□□□□ -0.63
CSTF3-203ENST00000438862 TMEM248Q9NWD8 314 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 SIDT1Q9NXL6 827 aaKnown RBP11.09□□□□□ -0.63
CSTF3-203ENST00000438862 LUZP4Q9P127 313 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 DNAI1Q9UI46 699 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 SUFUQ9UMX1 484 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 ST14Q9Y5Y6 855 aa11.09□□□□□ -0.63
CSTF3-203ENST00000438862 PCNX1Q96RV3 2341 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 LGALS16A8MUM7 142 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 INSIG1O15503 277 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 CEACAM4O75871 244 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 KIAA0754O94854 1291 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 NDUFA10O95299 355 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 PIGNO95427 931 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 ERBB2P04626 1255 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 IVLP07476 585 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 ATP1A3P13637 1013 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 ADCY8P40145 1251 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 EPHA4P54764 986 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 ITGA1P56199 1179 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 UBASH3AP57075 661 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 POLR2LP62875 67 aaKnown RBP11.08□□□□□ -0.64
CSTF3-203ENST00000438862 NRG1Q02297 640 aaPredicted RBP11.08□□□□□ -0.64
CSTF3-203ENST00000438862 NR1I3Q14994 352 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 ZRSR2Q15696 482 aaKnown RBP11.08□□□□□ -0.64
CSTF3-203ENST00000438862 MIIPQ5JXC2 388 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.08□□□□□ -0.64
CSTF3-203ENST00000438862 FKBP15Q5T1M5 1219 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 AFMIDQ63HM1 303 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 ENOSF1Q7L5Y1 443 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 NLRP14Q86W24 1093 aa11.08□□□□□ -0.64
CSTF3-203ENST00000438862 PLXDC1Q8IUK5 500 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms