RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 OR6C4Q8NGE1 309 aa24.6■■□□□ 1.53
RAPGEF1-206ENST00000438647 MAPK15Q8TD08 544 aa24.6■■□□□ 1.53
RAPGEF1-206ENST00000438647 ZCCHC14Q8WYQ9 949 aaKnown RBP24.6■■□□□ 1.53
RAPGEF1-206ENST00000438647 AGAP2Q99490 1192 aa24.6■■□□□ 1.53
RAPGEF1-206ENST00000438647 FSD1LQ9BXM9 530 aa24.6■■□□□ 1.53
RAPGEF1-206ENST00000438647 GSDMCQ9BYG8 508 aa24.6■■□□□ 1.53
RAPGEF1-206ENST00000438647 TRABDQ9H4I3 376 aa24.6■■□□□ 1.53
RAPGEF1-206ENST00000438647 SIRPGQ9P1W8 387 aa24.6■■□□□ 1.53
RAPGEF1-206ENST00000438647 SUFUQ9UMX1 484 aa24.6■■□□□ 1.53
RAPGEF1-206ENST00000438647 KCNN4O15554 427 aa24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 ANXA9O76027 345 aa24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 HLA-DPA1P20036 260 aa24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 GNPDA1P46926 289 aa24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 CLDN6P56747 220 aa24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 DCDC1P59894 354 aa24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 TARDBPQ13148 414 aaKnown RBP eCLIP24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 DOK6Q6PKX4 331 aa24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 TMC3Q7Z5M5 1100 aa24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 MARCH9Q86YJ5 346 aa24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 DCBLD1Q8N8Z6 715 aa24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 KYQ8NBH2 561 aa24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 FAM46DQ8NEK8 389 aa24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 IPMKQ8NFU5 416 aa24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 OXNAD1Q96HP4 312 aaPredicted RBP24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 COX14Q96I36 57 aa24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 MRGPRX2Q96LB1 330 aa24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 PPP1R2P1Q96PQ5 205 aa24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 CCDC86Q9H6F5 360 aaKnown RBP24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 NFKBIL1Q9UBC1 381 aaPredicted RBP24.59■■□□□ 1.53
RAPGEF1-206ENST00000438647 MT-CO3P00414 261 aa24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 SLC4A1P02730 911 aa24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 GEMP55040 296 aa24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 CAMK2BQ13554 666 aa24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 PRPSAP1Q14558 356 aa24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 ZNF662Q6ZS27 426 aa24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 WDR48Q8TAF3 677 aa24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 GPBAR1Q8TDU6 330 aa24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 SCARF2Q96GP6 870 aaPredicted RBP24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 ALS2CR12Q96Q35 445 aa24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 DEPDC7Q96QD5 511 aa24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 WDR24Q96S15 920 aa24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 FAM118BQ9BPY3 351 aa24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 ZSCAN5AQ9BUG6 496 aa24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 SUDS3Q9H7L9 328 aaPredicted RBP24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 C10orf88Q9H8K7 445 aa24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 HACD3Q9P035 362 aa24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 VPS18Q9P253 973 aa24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 AAR2Q9Y312 384 aaKnown RBP24.58■■□□□ 1.53
RAPGEF1-206ENST00000438647 IGF2RP11717 2491 aa24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 FREM2Q5SZK8 3169 aa24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 TRABD2BA6NFA1 517 aa24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 F5H423 210 aaPredicted RBP24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 INPP4BO15327 924 aa24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 ASMTLO95671 621 aa24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 POLD2P49005 469 aa24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 KLF1Q13351 362 aaPredicted RBP24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 SLC1A5Q15758 541 aa24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 SIRPB2Q5JXA9 342 aa24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 ANKRD20A2Q5SQ80 823 aa24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 SEL1L2Q5TEA6 688 aa24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 ANKRD20A1Q5TYW2 823 aa24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 ANKRD20A3Q5VUR7 823 aa24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 PDPK2PQ6A1A2 396 aa24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 TRIM74Q86UV6 250 aa24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 EID2BQ96D98 161 aa24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 SPATA13Q96N96 652 aa24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 DPEP2Q9H4A9 486 aa24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 TMEM98Q9Y2Y6 226 aa24.57■■□□□ 1.52
RAPGEF1-206ENST00000438647 FUCA1P04066 466 aa24.56■■□□□ 1.52
RAPGEF1-206ENST00000438647 FGF1P05230 155 aa24.56■■□□□ 1.52
RAPGEF1-206ENST00000438647 ZNF569Q5MCW4 686 aa24.56■■□□□ 1.52
RAPGEF1-206ENST00000438647 CDCP2Q5VXM1 449 aa24.56■■□□□ 1.52
RAPGEF1-206ENST00000438647 OGFOD3Q6PK18 319 aa24.56■■□□□ 1.52
RAPGEF1-206ENST00000438647 GALNT13Q8IUC8 556 aa24.56■■□□□ 1.52
RAPGEF1-206ENST00000438647 SLC25A41Q8N5S1 370 aa24.56■■□□□ 1.52
RAPGEF1-206ENST00000438647 TRAM1L1Q8N609 369 aa24.56■■□□□ 1.52
RAPGEF1-206ENST00000438647 GPR156Q8NFN8 814 aa24.56■■□□□ 1.52
RAPGEF1-206ENST00000438647 CCL4L1Q8NHW4 92 aa24.56■■□□□ 1.52
RAPGEF1-206ENST00000438647 LRRC45Q96CN5 670 aa24.56■■□□□ 1.52
RAPGEF1-206ENST00000438647 NXPE2Q96DL1 559 aa24.56■■□□□ 1.52
RAPGEF1-206ENST00000438647 OR2M4Q96R27 311 aa24.56■■□□□ 1.52
RAPGEF1-206ENST00000438647 SPATA16Q9BXB7 569 aa24.56■■□□□ 1.52
RAPGEF1-206ENST00000438647 ZMIZ1Q9ULJ6 1067 aa24.56■■□□□ 1.52
RAPGEF1-206ENST00000438647 GPSM3Q9Y4H4 160 aa24.56■■□□□ 1.52
RAPGEF1-206ENST00000438647 SPO11Q9Y5K1 396 aa24.56■■□□□ 1.52
RAPGEF1-206ENST00000438647 FADS2P1A8MWK0 482 aa24.55■■□□□ 1.52
RAPGEF1-206ENST00000438647 B4DGG1 531 aa24.55■■□□□ 1.52
RAPGEF1-206ENST00000438647 HMGCLP35914 325 aa24.55■■□□□ 1.52
RAPGEF1-206ENST00000438647 ADCY8P40145 1251 aa24.55■■□□□ 1.52
RAPGEF1-206ENST00000438647 PERM1Q5SV97 790 aa24.55■■□□□ 1.52
RAPGEF1-206ENST00000438647 ZDHHC20Q5W0Z9 365 aa24.55■■□□□ 1.52
RAPGEF1-206ENST00000438647 ALS2CLQ60I27 953 aa24.55■■□□□ 1.52
RAPGEF1-206ENST00000438647 GPR26Q8NDV2 337 aa24.55■■□□□ 1.52
RAPGEF1-206ENST00000438647 PLEKHG4BQ96PX9 1271 aa24.55■■□□□ 1.52
RAPGEF1-206ENST00000438647 CCDC3Q9BQI4 270 aa24.55■■□□□ 1.52
RAPGEF1-206ENST00000438647 RMI1Q9H9A7 625 aa24.55■■□□□ 1.52
RAPGEF1-206ENST00000438647 GRPEL1Q9HAV7 217 aa24.55■■□□□ 1.52
RAPGEF1-206ENST00000438647 DKK4Q9UBT3 224 aa24.55■■□□□ 1.52
RAPGEF1-206ENST00000438647 CNOT6Q9ULM6 557 aaKnown RBP24.55■■□□□ 1.52
RAPGEF1-206ENST00000438647 ASXL3Q9C0F0 2248 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms