RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 HOXD13P35453 343 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 UBA7P41226 1012 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 DSCR9P59020 149 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 TAS2R40P59535 323 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 BNC1Q01954 994 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 TRAF3Q13114 568 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 MAD2L1Q13257 205 aaPredicted RBP3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 CUL4AQ13619 759 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 DHX34Q14147 1143 aaKnown RBP3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 WTAPQ15007 396 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 PNLIPRP3Q17RR3 467 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 KIF19Q2TAC6 998 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 EIF2S3LQ2VIR3 472 aaKnown RBP3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 MYLK3Q32MK0 819 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 CDONQ4KMG0 1287 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 RILPL1Q5EBL4 403 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 FAM205BPQ63HN1 556 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 DUS1LQ6P1R4 473 aaKnown RBP3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 CFAP161Q6P656 301 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 CCNI2Q6ZMN8 369 aaPredicted RBP3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 CREB3L2Q70SY1 520 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 ADHFE1Q8IWW8 467 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 PGBD5Q8N414 524 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 NEXN-AS1Q8NBZ9 246 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 TMED6Q8WW62 240 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 NSUN4Q96CB9 384 aaKnown RBP3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 FAM120BQ96EK7 910 aaKnown RBP3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 NUDCD1Q96RS6 583 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 FIZ1Q96SL8 496 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 KCNN2Q9H2S1 579 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 MMP25Q9NPA2 562 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 CD93Q9NPY3 652 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 ZNF215Q9UL58 517 aaPredicted RBP3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 R3HDM2Q9Y2K5 976 aaKnown RBP3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 LOXL2Q9Y4K0 774 aa3.78□□□□□ -1.8
LSM1P1-201ENST00000438629 IGKV2D-30A0A075B6S6 120 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 C1orf226A1L170 272 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 M0QZ24 198 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 ACOT8O14734 319 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 HS3ST1O14792 307 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 EGFP01133 1207 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 RB1P06400 928 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 SRPRAP08240 638 aaKnown RBP3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 ZNF12P17014 697 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 MCCP23508 829 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 BDNFP23560 247 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 CLCN3P51790 818 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 NANOS2P60321 138 aaKnown RBP3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 PDE1BQ01064 536 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 MC1RQ01726 317 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 CREB5Q02930 508 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 DDR1Q08345 913 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 EPS8Q12929 822 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 CHAF1BQ13112 559 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 IKQ13123 557 aaPredicted RBP3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 MYBPHQ13203 477 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 TNFAIP1Q13829 316 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 SLC39A14Q15043 492 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 MEA1Q16626 185 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 DECR1Q16698 335 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 DUSP28Q4G0W2 176 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 LRCH2Q5VUJ6 765 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 TRNP1Q6NT89 227 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 WDR73Q6P4I2 378 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 RHBDF2Q6PJF5 856 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 GLCCI1Q86VQ1 547 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 CHERPQ8IWX8 916 aaKnown RBP3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 ZNF114Q8NC26 417 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 KCNH5Q8NCM2 988 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 OR8K5Q8NH50 307 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 NUDCD2Q8WVJ2 157 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 APBB2Q92870 758 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 ZKSCAN4Q969J2 545 aaPredicted RBP3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 ORAI1Q96D31 301 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 SCMH1Q96GD3 660 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 PPP1R13BQ96KQ4 1090 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 C3orf30Q96M34 536 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 OR2A14Q96R47 310 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 OGFRQ9NZT2 677 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 SIX4Q9UIU6 781 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 GPR34Q9UPC5 381 aa3.77□□□□□ -1.81
LSM1P1-201ENST00000438629 MAGEA13PA6NCF6 341 aa3.76□□□□□ -1.81
LSM1P1-201ENST00000438629 TMCC2O75069 709 aa3.76□□□□□ -1.81
LSM1P1-201ENST00000438629 CLDN14O95500 239 aa3.76□□□□□ -1.81
LSM1P1-201ENST00000438629 TGFB3P10600 412 aa3.76□□□□□ -1.81
LSM1P1-201ENST00000438629 CCKARP32238 428 aa3.76□□□□□ -1.81
LSM1P1-201ENST00000438629 CAMPP49913 170 aa3.76□□□□□ -1.81
LSM1P1-201ENST00000438629 ART1P52961 327 aa3.76□□□□□ -1.81
LSM1P1-201ENST00000438629 DLG1Q12959 904 aa3.76□□□□□ -1.81
LSM1P1-201ENST00000438629 ACVR2BQ13705 512 aa3.76□□□□□ -1.81
LSM1P1-201ENST00000438629 NFATC4Q14934 902 aa3.76□□□□□ -1.81
LSM1P1-201ENST00000438629 ZNF805Q5CZA5 627 aa3.76□□□□□ -1.81
LSM1P1-201ENST00000438629 RAB41Q5JT25 222 aa3.76□□□□□ -1.81
LSM1P1-201ENST00000438629 PMS2CLQ68D20 193 aa3.76□□□□□ -1.81
LSM1P1-201ENST00000438629 HIST2H2BCQ6DN03 193 aa3.76□□□□□ -1.81
LSM1P1-201ENST00000438629 HIST2H2BDQ6DRA6 164 aa3.76□□□□□ -1.81
LSM1P1-201ENST00000438629 NADSYN1Q6IA69 706 aa3.76□□□□□ -1.81
LSM1P1-201ENST00000438629 RGMBQ6NW40 437 aa3.76□□□□□ -1.81
LSM1P1-201ENST00000438629 TSPAN33Q86UF1 283 aa3.76□□□□□ -1.81
LSM1P1-201ENST00000438629 FOXRED2Q8IWF2 684 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms