RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ARHGAP12Q8IWW6 846 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 TTC5Q8N0Z6 440 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 MMP21Q8N119 569 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 DBF4BQ8NFT6 615 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 OR5M3Q8NGP4 307 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 HUS1BQ8NHY5 278 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 GRAPLQ8TC17 118 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 HMGB4Q8WW32 186 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 ARHGAP45Q92619 1136 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 SLAMF9Q96A28 289 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 PAFAH2Q99487 392 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 PARK7Q99497 189 aaKnown RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 NDC1Q9BTX1 674 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 CDK19Q9BWU1 502 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 SLC29A3Q9BZD2 475 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 PITHD1Q9GZP4 211 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 POLR1EQ9GZS1 481 aaKnown RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 THAP2Q9H0W7 228 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 LRRC40Q9H9A6 602 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 UNKLQ9H9P5 680 aaKnown RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 FBRSL1Q9HCM7 1045 aaKnown RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 AKIP1Q9NQ31 210 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 TLR8Q9NR97 1041 aaKnown RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 KLC4Q9NSK0 619 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 ARL8BQ9NVJ2 186 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 RAB20Q9NX57 234 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 HCN3Q9P1Z3 774 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 ATP6V1HQ9UI12 483 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 CDH22Q9UJ99 828 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 DNPEPQ9ULA0 475 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 ZDHHC8Q9ULC8 765 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 STX8Q9UNK0 236 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 RCE1Q9Y256 329 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 RUVBL1Q9Y265 456 aaKnown RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 PCDHB2Q9Y5E7 798 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 COMMD3-BMI1R4GMX3 469 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 SPACA6W5XKT8 324 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 COL11A2P13942 1736 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 KIF7Q2M1P5 1343 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 PHLPP2Q6ZVD8 1323 aa3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 MYBBP1AQ9BQG0 1328 aaKnown RBP3.66□□□□□ -1.82
HMGB1P12-201ENST00000438594 TRAV6A0A075B6T7 132 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 A0A087WV48 116 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 A0A0A6YYJ9 748 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 ELOVL7A1L3X0 281 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 GSAPA4D1B5 854 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 OR6C74A6NCV1 312 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 ANXA2P2A6NMY6 339 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 TEX22C9J3V5 150 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 F8WDY8 70 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 H7C4K7 107 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 SLC30A4O14863 429 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 ATP2A1O14983 1001 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 NVLO15381 856 aaKnown RBP3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 HOXA3O43365 443 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 KCNJ13O60928 360 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 SURF6O75683 361 aaKnown RBP3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 RHBDL1O75783 438 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 CDKL5O76039 1030 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 SEC24DO94855 1032 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 UNC5CO95185 931 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 LY86O95711 162 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 CER1O95813 267 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 GBAP04062 536 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 CFIP05156 583 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 CD1AP06126 327 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 FAM86B2P0C5J1 330 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 FAM58BPP0C7Q3 252 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 HKR1P10072 659 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 COX7A2P14406 83 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 TPH1P17752 444 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 DDCP20711 480 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 PRKACBP22694 351 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 PTPN6P29350 595 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 CORO1AP31146 461 aaKnown RBP3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 ARHGAP25P42331 645 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 RAB28P51157 221 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 ELLP55199 621 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 ABATP80404 500 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 GUCY1B3Q02153 619 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 SCGB2A2Q13296 93 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 LAMB3Q13751 1172 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 ARHGEF7Q14155 803 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 GIT2Q14161 759 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 ARHGAP19Q14CB8 494 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 ZMYND11Q15326 602 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 FASTKD1Q53R41 847 aaKnown RBP3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 MFSD14BQ5SR56 506 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 PDPK2PQ6A1A2 396 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 ANKRD40Q6AI12 368 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 JADE1Q6IE81 842 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 CAPRIN2Q6IMN6 1127 aaKnown RBP3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 PSRC1Q6PGN9 363 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 C6orf89Q6UWU4 347 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 SERPINA13PQ6UXR4 307 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 KIF6Q6ZMV9 814 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 TRAPPC11Q7Z392 1133 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 TADA2BQ86TJ2 420 aa3.65□□□□□ -1.83
HMGB1P12-201ENST00000438594 WDR5BQ86VZ2 330 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms