RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 PLEKHG4BQ96PX9 1271 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 TRIM51Q9BSJ1 452 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 SPATA16Q9BXB7 569 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 FGF22Q9HCT0 170 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 PHPT1Q9NRX4 125 aaPredicted RBP16.07■□□□□ 0.16
SNRPB-202ENST00000438552 RAD18Q9NS91 495 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 TM7SF3Q9NS93 570 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 KLF15Q9UIH9 416 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 CDC23Q9UJX2 597 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 CDV3Q9UKY7 258 aaKnown RBP16.07■□□□□ 0.16
SNRPB-202ENST00000438552 CEP250Q9BV73 2442 aa16.07■□□□□ 0.16
SNRPB-202ENST00000438552 C2orf81A6NN90 581 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 CCL22O00626 93 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 GAPDHSO14556 408 aaPredicted RBP16.06■□□□□ 0.16
SNRPB-202ENST00000438552 SCAMP1O15126 338 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 TTI1O43156 1089 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 GPR39O43194 453 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 LDB2O43679 373 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 HTR1BP28222 390 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 SPAM1P38567 509 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 MAGEA6P43360 314 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 TMPRSS15P98073 1019 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 ALG11Q2TAA5 492 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 CCDC38Q502W7 563 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 DOK6Q6PKX4 331 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 ENPP7Q6UWV6 458 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 MICALCLQ6ZW33 695 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 GATAD2AQ86YP4 633 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 DNAJC1Q96KC8 554 aaKnown RBP16.06■□□□□ 0.16
SNRPB-202ENST00000438552 RUNDC3BQ96NL0 473 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 CDH19Q9H159 772 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 TCEAL2Q9H3H9 227 aaPredicted RBP16.06■□□□□ 0.16
SNRPB-202ENST00000438552 KLQ9UEF7 1012 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 FKBPLQ9UIM3 349 aa16.06■□□□□ 0.16
SNRPB-202ENST00000438552 DFNA5O60443 496 aa16.05■□□□□ 0.16
SNRPB-202ENST00000438552 TUBB4AP04350 444 aa16.05■□□□□ 0.16
SNRPB-202ENST00000438552 PYGLP06737 847 aa16.05■□□□□ 0.16
SNRPB-202ENST00000438552 HOXC4P09017 264 aaPredicted RBP16.05■□□□□ 0.16
SNRPB-202ENST00000438552 ZNF883P0CG24 379 aa16.05■□□□□ 0.16
SNRPB-202ENST00000438552 NME1P15531 152 aaKnown RBP16.05■□□□□ 0.16
SNRPB-202ENST00000438552 RXRGP48443 463 aa16.05■□□□□ 0.16
SNRPB-202ENST00000438552 SESN2P58004 480 aaPredicted RBP16.05■□□□□ 0.16
SNRPB-202ENST00000438552 MRPS25P82663 173 aaKnown RBP16.05■□□□□ 0.16
SNRPB-202ENST00000438552 CDK16Q00536 496 aa16.05■□□□□ 0.16
SNRPB-202ENST00000438552 CKAP4Q07065 602 aaKnown RBP16.05■□□□□ 0.16
SNRPB-202ENST00000438552 BNIP3Q12983 259 aa16.05■□□□□ 0.16
SNRPB-202ENST00000438552 RSPO4Q2I0M5 234 aaPredicted RBP16.05■□□□□ 0.16
SNRPB-202ENST00000438552 ZNF572Q7Z3I7 529 aaPredicted RBP16.05■□□□□ 0.16
SNRPB-202ENST00000438552 NLRP8Q86W28 1048 aa16.05■□□□□ 0.16
SNRPB-202ENST00000438552 PHACTR4Q8IZ21 702 aa16.05■□□□□ 0.16
SNRPB-202ENST00000438552 TRAM1L1Q8N609 369 aa16.05■□□□□ 0.16
SNRPB-202ENST00000438552 OR56A4Q8NGH8 313 aa16.05■□□□□ 0.16
SNRPB-202ENST00000438552 OR1E3Q8WZA6 343 aa16.05■□□□□ 0.16
SNRPB-202ENST00000438552 TSACCQ96A04 125 aaPredicted RBP16.05■□□□□ 0.16
SNRPB-202ENST00000438552 HIC2Q96JB3 615 aa16.05■□□□□ 0.16
SNRPB-202ENST00000438552 ZSCAN5AQ9BUG6 496 aa16.05■□□□□ 0.16
SNRPB-202ENST00000438552 FRMD8Q9BZ67 464 aaPredicted RBP16.05■□□□□ 0.16
SNRPB-202ENST00000438552 SUDS3Q9H7L9 328 aaPredicted RBP16.05■□□□□ 0.16
SNRPB-202ENST00000438552 ARFGAP3Q9NP61 516 aa16.05■□□□□ 0.16
SNRPB-202ENST00000438552 IL26Q9NPH9 171 aa16.05■□□□□ 0.16
SNRPB-202ENST00000438552 MRPL40Q9NQ50 206 aaKnown RBP16.05■□□□□ 0.16
SNRPB-202ENST00000438552 APOBEC3BQ9UH17 382 aaKnown RBP16.05■□□□□ 0.16
SNRPB-202ENST00000438552 CNOT6Q9ULM6 557 aaKnown RBP16.05■□□□□ 0.16
SNRPB-202ENST00000438552 OAS3Q9Y6K5 1087 aaKnown RBP16.05■□□□□ 0.16
SNRPB-202ENST00000438552 CACNA1AO00555 2505 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 GLYATL1P3A0A0U1RQE8 302 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 PRSS38A1L453 326 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 H3BM21 787 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 GOLGA8MH3BSY2 632 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 DNALI1O14645 258 aaPredicted RBP16.04■□□□□ 0.16
SNRPB-202ENST00000438552 YKT6O15498 198 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 PPFIA2O75334 1257 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 PIAS2O75928 621 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 CSF2P04141 144 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 CD59P13987 128 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 JUNDP17535 347 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 KELP23276 732 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 ADCY8P40145 1251 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 POLD2P49005 469 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 SRP54P61011 504 aaKnown RBP16.04■□□□□ 0.16
SNRPB-202ENST00000438552 CRADDP78560 199 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 PDE1BQ01064 536 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 PPARDQ03181 441 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 DHX34Q14147 1143 aaKnown RBP16.04■□□□□ 0.16
SNRPB-202ENST00000438552 TCEA2Q15560 299 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 CHRNA6Q15825 494 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 ATP13A5Q4VNC0 1218 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 IZUMO3Q5VZ72 239 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 SYDE1Q6ZW31 735 aaPredicted RBP16.04■□□□□ 0.16
SNRPB-202ENST00000438552 RD3Q7Z3Z2 195 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 HID1Q8IV36 788 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 ZNF548Q8NEK5 533 aaPredicted RBP16.04■□□□□ 0.16
SNRPB-202ENST00000438552 PTCD2Q8WV60 388 aaKnown RBP16.04■□□□□ 0.16
SNRPB-202ENST00000438552 COX14Q96I36 57 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 UCKL1Q9NWZ5 548 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 MOSPD1Q9UJG1 213 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 BTBD3Q9Y2F9 522 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 TMEM98Q9Y2Y6 226 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 MRFAP1Q9Y605 127 aa16.04■□□□□ 0.16
SNRPB-202ENST00000438552 CABIN1Q9Y6J0 2220 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms