RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 ADIPOQQ15848 244 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 ZNF585BQ52M93 769 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 SOWAHCQ53LP3 525 aaPredicted RBP3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 GKAP1Q5VSY0 366 aaPredicted RBP3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 NADSYN1Q6IA69 706 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 SLC36A4Q6YBV0 504 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 CCNI2Q6ZMN8 369 aaPredicted RBP3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 KRBA2Q6ZNG9 492 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 BRINP3Q76B58 766 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 SZRD1Q7Z422 152 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 RBM23Q86U06 439 aaKnown RBP3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 PGBD5Q8N414 524 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 ZKSCAN4Q969J2 545 aaPredicted RBP3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 NSUN4Q96CB9 384 aaKnown RBP3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 FAM120BQ96EK7 910 aaKnown RBP3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 C1orf74Q96LT6 269 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 ACOX2Q99424 681 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 KCNN2Q9H2S1 579 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 PDZD7Q9H5P4 517 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 MMP25Q9NPA2 562 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 LTB4R2Q9NPC1 389 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 NOX4Q9NPH5 578 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 OCIAD1Q9NX40 245 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 CNOT8Q9UFF9 292 aaKnown RBP3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 POLG2Q9UHN1 485 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 TINAGQ9UJW2 476 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 SNX9Q9Y5X1 595 aa3.68□□□□□ -1.82
TRAPPC13-204ENST00000438419 BTBD18B2RXH4 712 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 B4DLN1 442 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 DAB1O75553 588 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 JRKO75564 520 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 RFPL2O75678 378 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 PAPSS2O95340 614 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 STARD3NLO95772 234 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 UBA1P22314 1058 aaKnown RBP3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 RAD52P43351 418 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 FASLGP48023 281 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 CLCNKAP51800 687 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 ART1P52961 327 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 HNRNPH2P55795 449 aaKnown RBP3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 CSNK2A1P68400 391 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 LRMPQ12912 555 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 CRYMQ14894 314 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 CDONQ4KMG0 1287 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 MFSD4BQ5TF39 518 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 FRG2Q64ET8 278 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 KIAA1161Q6NSJ0 714 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 WDR73Q6P4I2 378 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 GLDNQ6ZMI3 551 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 SEPT14Q6ZU15 432 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 FOXRED2Q8IWF2 684 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 RPAP2Q8IXW5 612 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 HACE1Q8IYU2 909 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 RNF168Q8IYW5 571 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 TAGAPQ8N103 731 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 ZNF114Q8NC26 417 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 CSNK2A3Q8NEV1 391 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 OR14L1PQ8NHC6 308 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 NUDCD2Q8WVJ2 157 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 IGSF8Q969P0 613 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 ERP27Q96DN0 273 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 CALML4Q96GE6 196 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 ADGRG7Q96K78 797 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 PPP1R13BQ96KQ4 1090 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 ZNF385AQ96PM9 386 aaKnown RBP3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 SEPT5Q99719 369 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 NCAPGQ9BPX3 1015 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 MAK16Q9BXY0 300 aaKnown RBP3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 IL25Q9H293 177 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 C6orf106Q9H6K1 298 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 PCDH9Q9HC56 1237 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 MCM9Q9NXL9 1143 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 SMARCAL1Q9NZC9 954 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 ZNF224Q9NZL3 707 aa3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 CWC15Q9P013 229 aaKnown RBP3.67□□□□□ -1.82
TRAPPC13-204ENST00000438419 FRMD3A2A2Y4 597 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 AGAP14A8MT82 685 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 A8MZ25 164 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 ACOT8O14734 319 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 TCERG1O14776 1098 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 TMCC2O75069 709 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 TSPAN9O75954 239 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 CSH1P0DML2 217 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 CSH2P0DML3 217 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 TGFB3P10600 412 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 TMEM11P17152 192 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 MCM3P25205 808 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 BDKRB2P30411 391 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 GCH1P30793 250 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 KRT20P35900 424 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 GARSP41250 739 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 PIK3CAP42336 1068 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 CDH8P55286 799 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 MRPS34P82930 218 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 FOXM1Q08050 763 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 DLG1Q12959 904 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 GRIK2Q13002 908 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 SNTA1Q13424 505 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 ACVR2BQ13705 512 aa3.66□□□□□ -1.82
TRAPPC13-204ENST00000438419 TNFAIP1Q13829 316 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms