RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 FAM163BP0C2L3 166 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 UROSP10746 265 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 KCNE1P15382 129 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 NCK1P16333 377 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 CDH3P22223 829 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 JAK1P23458 1154 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 IL4RP24394 825 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 PBX3P40426 434 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 CXCR3P49682 368 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 NDST2P52849 883 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 LSM3P62310 102 aaKnown RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 HERVK_113P63132 956 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 IKBKEQ14164 716 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 HIST2H2ACQ16777 129 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 CCNYL2Q5T2Q4 361 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 RBM20Q5T481 1227 aaKnown RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 OGFRL1Q5TC84 451 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 HIST2H2AA3Q6FI13 130 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 KBTBD2Q8IY47 623 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 ARRDC4Q8NCT1 418 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 MTFMTQ96DP5 389 aaKnown RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 HMCESQ96FZ2 354 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 TPD52L3Q96J77 140 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 ERVK-6Q9BXR3 956 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 C6orf62Q9GZU0 229 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 AKTIPQ9H8T0 292 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 AGO1Q9UL18 857 aaKnown RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 ADAMTS5Q9UNA0 930 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 GMPPBQ9Y5P6 360 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 RREB1Q92766 1687 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 F8W810 466 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 PDLIM1O00151 329 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 SLC28A1O00337 649 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 SDHDO14521 159 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 TLR5O60602 858 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 EPN2O95208 641 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 SIX3O95343 332 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 OR4Q2P0C623 313 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 MTHFRP42898 656 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 ZNF33AQ06730 810 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 BCL2L1Q07817 233 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 TRAF3Q13114 568 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 ITGA7Q13683 1181 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 RFTN1Q14699 578 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 TSNQ15631 228 aaKnown RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 CCDC85BQ15834 202 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 INTS11Q5TA45 600 aaKnown RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 C16orf59Q7L2K0 433 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 KBTBD6Q86V97 674 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 TMEM130Q8N3G9 435 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 TXNDC5Q8NBS9 432 aaKnown RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 SCAMP5Q8TAC9 235 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 PNPT1Q8TCS8 783 aaKnown RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 MCOLN3Q8TDD5 553 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 POP5Q969H6 163 aaKnown RBP6.66□□□□□ -1.34
CSDE1-205ENST00000438362 PSMG2Q969U7 264 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 OR52E6Q96RD3 313 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 CHID1Q9BWS9 393 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 LMCD1Q9NZU5 365 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 SH3BP4Q9P0V3 963 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 OAZ3Q9UMX2 235 aa6.66□□□□□ -1.34
CSDE1-205ENST00000438362 FAM72CH0Y354 149 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 PIRO00625 290 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 PRMT5O14744 637 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-205ENST00000438362 DCLK1O15075 740 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 SEC24AO95486 1093 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 IFNA14P01570 189 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 CYP2A7P20853 494 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 FCGRTP55899 365 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 LSAMPQ13449 338 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 BOP1Q14137 746 aaKnown RBP6.65□□□□□ -1.34
CSDE1-205ENST00000438362 ZBED5Q49AG3 693 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 PABPC1LQ4VXU2 614 aaKnown RBP6.65□□□□□ -1.34
CSDE1-205ENST00000438362 FAM72AQ5TYM5 149 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 FAM72DQ6L9T8 149 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 TMEM214Q6NUQ4 689 aaKnown RBP6.65□□□□□ -1.34
CSDE1-205ENST00000438362 KCTD8Q6ZWB6 473 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 NECAB2Q7Z6G3 386 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 FAM72BQ86X60 149 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 SYT12Q8IV01 421 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 BBS7Q8IWZ6 715 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 BRSK1Q8TDC3 778 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 S100ZQ8WXG8 99 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 SOCS4Q8WXH5 440 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 MOCOSQ96EN8 888 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 COX4I2Q96KJ9 171 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 SMOQ99835 787 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 NUSAP1Q9BXS6 441 aaKnown RBP6.65□□□□□ -1.34
CSDE1-205ENST00000438362 CEP44Q9C0F1 390 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 PREBQ9HCU5 417 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 ADPRHL2Q9NX46 363 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 GMIPQ9P107 970 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 ZNHIT2Q9UHR6 403 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 GNPTGQ9UJJ9 305 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 DNMT3LQ9UJW3 386 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 TMCC3Q9ULS5 477 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 SH3GLB1Q9Y371 365 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 OR51F1A6NGY5 319 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 TP73O15350 636 aa6.65□□□□□ -1.34
CSDE1-205ENST00000438362 HOXA2O43364 376 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms