RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 KCNA10Q16322 511 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 CROCCP3Q8IVE0 287 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 TRAPPC12Q8WVT3 735 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 PMEPA1Q969W9 287 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 GPR88Q9GZN0 384 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 CDH19Q9H159 772 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 PORCNQ9H237 461 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 CCNB1IP1Q9NPC3 277 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 CDC42BPBQ9Y5S2 1711 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 QRICH2Q9H0J4 1663 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 ZCCHC11Q5TAX3 1644 aaKnown RBP11.17□□□□□ -0.62
SCN4A-201ENST00000435607 SLC33A1O00400 549 aaPredicted RBP11.17□□□□□ -0.62
SCN4A-201ENST00000435607 B3GALT2O43825 422 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 PLOD3O60568 738 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 MC4RP32245 332 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 PTPN5P54829 565 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 CDH4P55283 916 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 ITGA7Q13683 1181 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 ANKRD23Q86SG2 305 aa11.17□□□□□ -0.62
SCN4A-201ENST00000435607 CLVS1Q8IUQ0 354 aaPredicted RBP11.17□□□□□ -0.62
SCN4A-201ENST00000435607 PRCCQ92733 491 aaPredicted RBP11.17□□□□□ -0.62
SCN4A-201ENST00000435607 TEX13CA0A0J9YWL9 993 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 PSMB4P28070 264 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 DGKEP52429 567 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 ALG1LQ6GMV1 187 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 RAB11FIP2Q7L804 512 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 TMEM145Q8NBT3 493 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 TATDN2Q93075 761 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 AIFM2Q9BRQ8 373 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 GTPBP2Q9BX10 602 aaKnown RBP11.16□□□□□ -0.62
SCN4A-201ENST00000435607 GSDMCQ9BYG8 508 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 TMPRSS4Q9NRS4 437 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 ETNK2Q9NVF9 386 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 USP27XA6NNY8 438 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 DHFRP00374 187 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 ADSSP30520 456 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 BPIFB6Q8NFQ5 453 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 PMM1Q92871 262 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 TCEAL3Q969E4 200 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 RFKQ969G6 155 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 BTBD10Q9BSF8 475 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 RAB11FIP5Q9BXF6 653 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 ZNF536O15090 1300 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 SIGLEC16A6NMB1 481 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 DCXO43602 365 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 CSTF2P33240 577 aaKnown RBP eCLIP11.16□□□□□ -0.62
SCN4A-201ENST00000435607 RGS8P57771 180 aaPredicted RBP11.16□□□□□ -0.62
SCN4A-201ENST00000435607 IL18R1Q13478 541 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 ARHGAP36Q6ZRI8 547 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 C3orf67Q6ZVT6 689 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 HID1Q8IV36 788 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 DNAJA4Q8WW22 397 aaPredicted RBP11.16□□□□□ -0.62
SCN4A-201ENST00000435607 AZIN2Q96A70 460 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 SLC22A18Q96BI1 424 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 NMD3Q96D46 503 aaKnown RBP11.16□□□□□ -0.62
SCN4A-201ENST00000435607 OXNAD1Q96HP4 312 aaPredicted RBP11.16□□□□□ -0.62
SCN4A-201ENST00000435607 SRMSQ9H3Y6 488 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 DISP1Q96F81 1524 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 MEIS2O14770 477 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 RGS10O43665 173 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 CDK14O94921 469 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 ECHS1P30084 290 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 CAV3P56539 151 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 RAB10P61026 200 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 GAD2Q05329 585 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 CCINQ13939 588 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 CPSF6Q16630 551 aaKnown RBP eCLIP11.16□□□□□ -0.62
SCN4A-201ENST00000435607 PARP15Q460N3 678 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 RDH11Q8TC12 318 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 TCP10LQ8TDR4 215 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 ZCCHC17Q9NP64 241 aaKnown RBP11.16□□□□□ -0.62
SCN4A-201ENST00000435607 SPAG4Q9NPE6 437 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 TDP1Q9NUW8 608 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 RSL24D1Q9UHA3 163 aaKnown RBP11.16□□□□□ -0.62
SCN4A-201ENST00000435607 SORCS3Q9UPU3 1222 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 OR1I1O60431 355 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 WFS1O76024 890 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 RB1P06400 928 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 TFEBP19484 476 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 RAB30Q15771 203 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 ABCA11PQ4W5N1 156 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 WASHC2DQ5SRD0 308 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 ANKRD52Q8NB46 1076 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 FCRL4Q96PJ5 515 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 TMEM121BQ9BXQ6 578 aaPredicted RBP11.16□□□□□ -0.62
SCN4A-201ENST00000435607 BAZ2BQ9UIF8 2168 aaKnown RBP11.16□□□□□ -0.62
SCN4A-201ENST00000435607 RENP00797 406 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 HCAR3P49019 387 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 TSPAN5P62079 268 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 ENPEPQ07075 957 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 C5orf22Q49AR2 442 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 EIPR1Q53HC9 387 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 FIGNQ5HY92 759 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 FBXO6Q9NRD1 293 aaPredicted RBP11.16□□□□□ -0.62
SCN4A-201ENST00000435607 NCDNQ9UBB6 729 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 C19orf25Q9UFG5 118 aaPredicted RBP11.16□□□□□ -0.62
SCN4A-201ENST00000435607 FBXO9Q9UK97 447 aaPredicted RBP11.16□□□□□ -0.62
SCN4A-201ENST00000435607 NAALADL1Q9UQQ1 740 aa11.16□□□□□ -0.62
SCN4A-201ENST00000435607 GON4LQ3T8J9 2241 aa11.15□□□□□ -0.62
SCN4A-201ENST00000435607 TPP1O14773 563 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms