RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 UBFD1O14562 309 aaKnown RBP15.53■□□□□ 0.08
SCARF1-203ENST00000434376 LDB2O43679 373 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 S1PR4O95977 384 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 RPL5P46777 297 aaKnown RBP15.53■□□□□ 0.08
SCARF1-203ENST00000434376 RARS2Q5T160 578 aaKnown RBP15.53■□□□□ 0.08
SCARF1-203ENST00000434376 ZNF549Q6P9A3 640 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 CDYL2Q8N8U2 506 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 WFDC5Q8TCV5 224 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 CDKN2AIPNLQ96HQ2 116 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 TREX1Q9NSU2 369 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 MKS1Q9NXB0 559 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 UBAP1Q9NZ09 502 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 PHF24Q9UPV7 400 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 RAI2Q9Y5P3 530 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 ATG2BQ96BY7 2078 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 PSMD3O43242 534 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 FOXD2O60548 495 aaPredicted RBP15.53■□□□□ 0.08
SCARF1-203ENST00000434376 EEF1DP29692 281 aaKnown RBP15.53■□□□□ 0.08
SCARF1-203ENST00000434376 MC4RP32245 332 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 GDF5P43026 501 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 TM4SF4P48230 202 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 CEACAM7Q14002 265 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 SLC44A4Q53GD3 710 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 KIAA0930Q6ICG6 404 aaPredicted RBP15.53■□□□□ 0.08
SCARF1-203ENST00000434376 BBS5Q8N3I7 341 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 KLHL23Q8NBE8 558 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 DNAJB14Q8TBM8 379 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 GPR78Q96P69 363 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 DCUN1D5Q9BTE7 237 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 A0A0C4DFX4 3053 aa15.53■□□□□ 0.08
SCARF1-203ENST00000434376 CASP8AP2Q9UKL3 1982 aa15.52■□□□□ 0.08
SCARF1-203ENST00000434376 STAMBPO95630 424 aa15.52■□□□□ 0.08
SCARF1-203ENST00000434376 THRAP10827 490 aa15.52■□□□□ 0.08
SCARF1-203ENST00000434376 PPARGP37231 505 aaPredicted RBP15.52■□□□□ 0.08
SCARF1-203ENST00000434376 GPR17Q13304 367 aa15.52■□□□□ 0.08
SCARF1-203ENST00000434376 NAB1Q13506 487 aa15.52■□□□□ 0.08
SCARF1-203ENST00000434376 GPNMBQ14956 572 aa15.52■□□□□ 0.08
SCARF1-203ENST00000434376 LHX8Q68G74 356 aa15.52■□□□□ 0.08
SCARF1-203ENST00000434376 MRNIPQ6NTE8 343 aa15.52■□□□□ 0.08
SCARF1-203ENST00000434376 MSANTD2Q6P1R3 559 aa15.52■□□□□ 0.08
SCARF1-203ENST00000434376 ZFP28Q8NHY6 868 aa15.52■□□□□ 0.08
SCARF1-203ENST00000434376 CDC26Q8NHZ8 85 aa15.52■□□□□ 0.08
SCARF1-203ENST00000434376 UPF3AQ9H1J1 476 aaKnown RBP15.52■□□□□ 0.08
SCARF1-203ENST00000434376 DNAJC28Q9NX36 388 aa15.52■□□□□ 0.08
SCARF1-203ENST00000434376 SH3BP1Q9Y3L3 701 aa15.52■□□□□ 0.08
SCARF1-203ENST00000434376 MYO15AQ9UKN7 3530 aa15.52■□□□□ 0.08
SCARF1-203ENST00000434376 RGSL1A5PLK6 1076 aa15.52■□□□□ 0.07
SCARF1-203ENST00000434376 MTX2O75431 263 aa15.52■□□□□ 0.07
SCARF1-203ENST00000434376 SEC24DO94855 1032 aaPredicted RBP15.52■□□□□ 0.07
SCARF1-203ENST00000434376 PCSK6P29122 969 aa15.52■□□□□ 0.07
SCARF1-203ENST00000434376 GRB7Q14451 532 aa15.52■□□□□ 0.07
SCARF1-203ENST00000434376 MYLK3Q32MK0 819 aa15.52■□□□□ 0.07
SCARF1-203ENST00000434376 KCTD21Q4G0X4 260 aa15.52■□□□□ 0.07
SCARF1-203ENST00000434376 CYS1Q717R9 158 aa15.52■□□□□ 0.07
SCARF1-203ENST00000434376 UMODL1-AS1Q8N2C9 162 aa15.52■□□□□ 0.07
SCARF1-203ENST00000434376 PQLC1Q8N2U9 271 aa15.52■□□□□ 0.07
SCARF1-203ENST00000434376 NAT16Q8N8M0 369 aa15.52■□□□□ 0.07
SCARF1-203ENST00000434376 MDGA1Q8NFP4 955 aa15.52■□□□□ 0.07
SCARF1-203ENST00000434376 APBB2Q92870 758 aa15.52■□□□□ 0.07
SCARF1-203ENST00000434376 ZDHHC4Q9NPG8 344 aa15.52■□□□□ 0.07
SCARF1-203ENST00000434376 POLR3BQ9NW08 1133 aaPredicted RBP15.52■□□□□ 0.07
SCARF1-203ENST00000434376 MID2Q9UJV3 735 aa15.52■□□□□ 0.07
SCARF1-203ENST00000434376 IKZF3Q9UKT9 509 aa15.52■□□□□ 0.07
SCARF1-203ENST00000434376 SNX13Q9Y5W8 968 aa15.52■□□□□ 0.07
SCARF1-203ENST00000434376 E7ENX8 843 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 SDHDO14521 159 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 PIP5K1BO14986 540 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 SMAD6O43541 496 aaKnown RBP15.51■□□□□ 0.07
SCARF1-203ENST00000434376 CRTAMO95727 393 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 MYL4P12829 197 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 DIO3P55073 304 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 YBX1P67809 324 aaKnown RBP15.51■□□□□ 0.07
SCARF1-203ENST00000434376 BTG3Q14201 252 aaPredicted RBP15.51■□□□□ 0.07
SCARF1-203ENST00000434376 AAK1Q2M2I8 961 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 SMYD5Q6GMV2 418 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 UGT3A1Q6NUS8 523 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 AAGABQ6PD74 315 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 MILR1Q7Z6M3 343 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 FBXW8Q8N3Y1 598 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 CALML6Q8TD86 181 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 EME1Q96AY2 570 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 CCT7Q99832 543 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 TMEM248Q9NWD8 314 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 CD84Q9UIB8 345 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 CLEC4EQ9ULY5 219 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 TMCO1Q9UM00 188 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 TDRD15B5MCY1 1934 aaKnown RBP15.51■□□□□ 0.07
SCARF1-203ENST00000434376 PDCD11Q14690 1871 aaKnown RBP15.51■□□□□ 0.07
SCARF1-203ENST00000434376 SMIM31A0A1B0GVY4 71 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 PSMD12O00232 456 aaPredicted RBP15.51■□□□□ 0.07
SCARF1-203ENST00000434376 GIPC1O14908 333 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 ATXN1LP0C7T5 689 aaKnown RBP15.51■□□□□ 0.07
SCARF1-203ENST00000434376 STK19P49842 368 aaPredicted RBP15.51■□□□□ 0.07
SCARF1-203ENST00000434376 APLP1P51693 650 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 SH3BP2P78314 561 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 POU4F1Q01851 419 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 PRICKLE1Q96MT3 831 aaPredicted RBP15.51■□□□□ 0.07
SCARF1-203ENST00000434376 TSPAN18Q96SJ8 248 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 EGFL8Q99944 293 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 ZNHIT2Q9UHR6 403 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms