RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 COLEC12Q5KU26 742 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 WSCD1Q658N2 575 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 UGT3A1Q6NUS8 523 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 FAM117BQ6P1L5 589 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 SCIMPQ6UWF3 145 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 PLEKHG7Q6ZR37 379 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 KIAA0408Q6ZU52 694 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 RALGPS2Q86X27 583 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 PSTKQ8IV42 348 aaKnown RBP7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 SPNS2Q8IVW8 549 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 CPSF7Q8N684 471 aaKnown RBP7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 CCDC185Q8N715 623 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 PNPT1Q8TCS8 783 aaKnown RBP7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 VPS33AQ96AX1 596 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 OMA1Q96E52 524 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 LRCH3Q96II8 777 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 SENP8Q96LD8 212 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 NODALQ96S42 347 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 HGH1Q9BTY7 390 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 MROQ9BYG7 248 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 SEZ6LQ9BYH1 1024 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 HACD3Q9P035 362 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 TCAF1Q9Y4C2 921 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 U3KQV3 271 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 ADGRA2Q96PE1 1338 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 H3BMM5 538 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 ABCB7O75027 752 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 PMPCBO75439 489 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 CNMDO75829 334 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 IL4RP24394 825 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 OR1G1P47890 313 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 LHX1P48742 406 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 CRYBB1P53674 252 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 RAB10P61026 200 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 ILF2Q12905 390 aaKnown RBP7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 BNIP2Q12982 314 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 PCBP1Q15365 356 aaKnown RBP eCLIP7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 TAZQ16635 292 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 TRIM60Q495X7 471 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 LDLRAD1Q5T700 205 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 INTS11Q5TA45 600 aaKnown RBP7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 AGAP9Q5VTM2 703 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 C9orf57Q5W0N0 161 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 FAM219BQ5XKK7 198 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 PMF1Q6P1K2 205 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 MAMDC4Q6UXC1 1216 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 CYP2U1Q7Z449 544 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 MMAAQ8IVH4 418 aaKnown RBP7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 TBC1D21Q8IYX1 336 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 OR8H2Q8N162 312 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 SCML4Q8N228 414 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 ARNTL2Q8WYA1 636 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 FIG4Q92562 907 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 SGCDQ92629 289 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 PROX1Q92786 737 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 EFHD2Q96C19 240 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 CLIP3Q96DZ5 547 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 ZHX1-C8orf76Q96EF9 292 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 IL12RB2Q99665 862 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 SLX1AQ9BQ83 275 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 FSD1LQ9BXM9 530 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 ADAMTS10Q9H324 1103 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 MID1IP1Q9NPA3 183 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 SIX4Q9UIU6 781 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 TRPV2Q9Y5S1 764 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 DNAJC25-GNG10A0A024R161 153 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 IGKV6-21A0A0C4DH24 114 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 AQP12BA6NM10 295 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 DFFAO00273 331 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 NME4O00746 187 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 ALDH1A2O94788 518 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 RASAL1O95294 804 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 SNAI1O95863 264 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 PRKCGP05129 697 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 HGFP14210 728 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 CPB1P15086 417 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 IL12AP29459 219 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 CDH5P33151 784 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 LIPEQ05469 1076 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 PCSK7Q16549 785 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 INAVAQ3KP66 663 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 TTC23Q5W5X9 447 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 STEAP4Q687X5 459 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 RGMBQ6NW40 437 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 PRMT9Q6P2P2 845 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 RNF180Q86T96 592 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 CCDC117Q8IWD4 279 aaPredicted RBP7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 AQP12AQ8IXF9 295 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 MFSD2AQ8NA29 543 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 KDM1BQ8NB78 822 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 TXNDC5Q8NBS9 432 aaKnown RBP7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 B3GALNT2Q8NCR0 500 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 NPLOC4Q8TAT6 608 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 SPPL2BQ8TCT7 592 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 GIPC2Q8TF65 315 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 CLEC4CQ8WTT0 213 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 HEXDCQ8WVB3 486 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 SLC45A3Q96JT2 553 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 ZFP42Q96MM3 310 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 TRIM62Q9BVG3 475 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms