RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 WDR55Q9H6Y2 383 aaPredicted RBP11.91□□□□□ -0.5
CTCFL-209ENST00000433949 TAS2R13Q9NYV9 303 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 GTSE1Q9NYZ3 720 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 RAI2Q9Y5P3 530 aa11.91□□□□□ -0.5
CTCFL-209ENST00000433949 BPTFQ12830 3046 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 LOC100653049A0A140TA62 436 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 NEMP1O14524 444 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 TSPAN3O60637 253 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 KRT34O76011 436 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 TMCC1O94876 653 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 PRLP01236 227 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 HNRNPA1P09651 372 aaKnown RBP eCLIP11.9□□□□□ -0.5
CTCFL-209ENST00000433949 CD1DP15813 335 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 CD9P21926 228 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 CDC25CP30307 473 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 TTPAP49638 278 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 SGSHP51688 502 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 ARF5P84085 180 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 CUL3Q13618 768 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 AARS2Q5JTZ9 985 aaKnown RBP11.9□□□□□ -0.5
CTCFL-209ENST00000433949 ZNF549Q6P9A3 640 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 TLDC1Q6P9B6 456 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 PGM2L1Q6PCE3 622 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 C16orf89Q6UX73 402 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 RAB44Q7Z6P3 723 aaPredicted RBP11.9□□□□□ -0.5
CTCFL-209ENST00000433949 PPFIBP2Q8ND30 876 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 OR4K2Q8NGD2 314 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 TMA16Q96EY4 203 aaKnown RBP11.9□□□□□ -0.5
CTCFL-209ENST00000433949 ZFRQ96KR1 1074 aaKnown RBP11.9□□□□□ -0.5
CTCFL-209ENST00000433949 ZSWIM3Q96MP5 696 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 PANX3Q96QZ0 392 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 SERPINI1Q99574 410 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 UNKQ9C0B0 810 aaKnown RBP11.9□□□□□ -0.5
CTCFL-209ENST00000433949 TFB2MQ9H5Q4 396 aaKnown RBP11.9□□□□□ -0.5
CTCFL-209ENST00000433949 ZNF385DQ9H6B1 395 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 ALG9Q9H6U8 611 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 ZDHHC7Q9NXF8 308 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 CLDND1Q9NY35 253 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 LSM7Q9UK45 103 aaKnown RBP11.9□□□□□ -0.5
CTCFL-209ENST00000433949 PRPF19Q9UMS4 504 aaKnown RBP11.9□□□□□ -0.5
CTCFL-209ENST00000433949 CCL26Q9Y258 94 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 ZNF510Q9Y2H8 683 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 MRPS23Q9Y3D9 190 aaKnown RBP11.9□□□□□ -0.5
CTCFL-209ENST00000433949 CPQQ9Y646 472 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 MTCH2Q9Y6C9 303 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 COMMD10Q9Y6G5 202 aa11.9□□□□□ -0.5
CTCFL-209ENST00000433949 NEMP2A6NFY4 417 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 MEI4A8MW99 385 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 H7C0S8 307 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 TBL1XO60907 577 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 MOSPD3O75425 235 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 NDUFS3O75489 264 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 KRT36O76013 467 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 LUC7L3O95232 432 aaKnown RBP11.9□□□□□ -0.51
CTCFL-209ENST00000433949 PYGLP06737 847 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 PIRTP0C851 137 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 PIK3R1P27986 724 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 CCR10P46092 362 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 ATP6V0D1P61421 351 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 HERVK_113P63132 956 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 SULT2A1Q06520 285 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 KCNC3Q14003 757 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 CYLC2Q14093 348 aaPredicted RBP11.9□□□□□ -0.51
CTCFL-209ENST00000433949 PDCD2Q16342 344 aaPredicted RBP11.9□□□□□ -0.51
CTCFL-209ENST00000433949 NXNQ6DKJ4 435 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 ELMSAN1Q6PJG2 1045 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 TMEM207Q6UWW9 146 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 METTL3Q86U44 580 aaKnown RBP11.9□□□□□ -0.51
CTCFL-209ENST00000433949 CUZD1Q86UP6 607 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 FAM217AQ8IXS0 508 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 DCAF4L2Q8NA75 395 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 BHMTQ93088 406 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 MOCOSQ96EN8 888 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 EXOC2Q96KP1 924 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 C19orf43Q9BQ61 176 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 FEM1AQ9BSK4 669 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 ERVK-6Q9BXR3 956 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 MEAF6Q9HAF1 191 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 ZBTB26Q9HCK0 441 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 VPS28Q9UK41 221 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 ACTL7AQ9Y615 435 aa11.9□□□□□ -0.51
CTCFL-209ENST00000433949 VGLL3A8MV65 326 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 BUD23O43709 281 aaKnown RBP11.89□□□□□ -0.51
CTCFL-209ENST00000433949 TBX10O75333 385 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 ZMPSTE24O75844 475 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 SLC4A1P02730 911 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 HNRNPLP14866 589 aaKnown RBP eCLIP11.89□□□□□ -0.51
CTCFL-209ENST00000433949 CEBPBP17676 345 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 ITGAXP20702 1163 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 INHBCP55103 352 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 CDH18Q13634 790 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 SEMA3AQ14563 771 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 TAF11Q15544 211 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 ZNF678Q5SXM1 525 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 NCEH1Q6PIU2 408 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 Q6ZNB5 142 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 MYLK4Q86YV6 388 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-209ENST00000433949 DEFB107AQ8IZN7 70 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 CARNMT1Q8N4J0 409 aa11.89□□□□□ -0.51
CTCFL-209ENST00000433949 LPCAT1Q8NF37 534 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms