RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 CLYBLQ8N0X4 340 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 PPHLN1Q8NEY8 458 aaKnown RBP11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 S100ZQ8WXG8 99 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 ELMO1Q92556 727 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.52□□□□□ -0.572e-15■■■■■ 27.5
HMGCS1-202ENST00000433297 FKBP10Q96AY3 582 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 NODALQ96S42 347 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 PSD2Q9BQI7 771 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 ALOXE3Q9BYJ1 711 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 GSTO2Q9H4Y5 243 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 ASB7Q9H672 318 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 ABCD2Q9UBJ2 740 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 TIMM22Q9Y584 194 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 TBX1O43435 398 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 PSMB9P28065 219 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 TGFBR1P36897 503 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 MTHFRP42898 656 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 NEK2P51955 445 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 NCS1P62166 190 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 DAG1Q14118 895 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 SNX17Q15036 470 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 PAFAH1B3Q15102 231 aaKnown RBP11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 DPY19L1Q2PZI1 675 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 CCDC103Q8IW40 242 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 PTCD2Q8WV60 388 aaKnown RBP11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 TWIST2Q8WVJ9 160 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 CCDC126Q96EE4 140 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 TLR9Q9NR96 1032 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 U3KQV3 271 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 BPTFQ12830 3046 aa11.52□□□□□ -0.57
HMGCS1-202ENST00000433297 LTBP1Q14766 1721 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 IGKV6D-21A0A0A0MT36 114 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 ANKRD34BA5PLL1 514 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 H0YAE9 185 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 DCLK1O15075 740 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 SNX2O60749 519 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 C7P10643 843 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 ARF4P18085 180 aaPredicted RBP11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 TRPC1P48995 793 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 ALDH3A2P51648 485 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 PFKFB4Q16877 469 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 AASDHQ4L235 1098 aaPredicted RBP11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 UBE2UQ5VVX9 321 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 TMC5Q6UXY8 1006 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 ARMC8Q8IUR7 673 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 OR6P1Q8NGX9 317 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 FBXO30Q8TB52 745 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 TMEM125Q96AQ2 219 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 C18orf25Q96B23 403 aaPredicted RBP11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 TEX37Q96LM6 180 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 NSUN5Q96P11 429 aaKnown RBP11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 KIFC1Q9BW19 673 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 FSD1LQ9BXM9 530 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 PARVBQ9HBI1 364 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 SCUBE2Q9NQ36 999 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 ZNF277Q9NRM2 450 aaPredicted RBP11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 INTS7Q9NVH2 962 aaKnown RBP11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 HACD3Q9P035 362 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 SLCO3A1Q9UIG8 710 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 ENPP5Q9UJA9 477 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 USP21Q9UK80 565 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 CRYL1Q9Y2S2 319 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 IFT52Q9Y366 437 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 NUP205Q92621 2012 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 ERI2A8K979 691 aaKnown RBP11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 WNT10BO00744 389 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 HS6ST1O60243 411 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 RBP1P09455 135 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 HOXD11P31277 338 aaPredicted RBP11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 MAP2K4P45985 399 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 SERPINB10P48595 397 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 OR4D2P58180 307 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 CTF1Q16619 201 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 ADPRMQ3LIE5 342 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 CATSPEREQ5SY80 951 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 RSBN1Q5VWQ0 802 aaPredicted RBP11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 PIM3Q86V86 326 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 CALML6Q8TD86 181 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 PPM1MQ96MI6 270 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 RMND5AQ9H871 391 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 ZFC3H1O60293 1989 aaKnown RBP11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 G3V2T6 193 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 GUCY1B2O75343 617 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 MFN2O95140 757 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 HTR1AP08908 422 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 CYP2C8P10632 490 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 MZF1P28698 734 aaPredicted RBP11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 PIGAP37287 484 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 ARCN1P48444 511 aaKnown RBP11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 GP2P55259 537 aaKnown RBP11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 IL5RAQ01344 420 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 TNFAIP2Q03169 654 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 CD47Q08722 323 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 NDUFA5Q16718 116 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 SPESP1Q6UW49 350 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 ARHGAP36Q6ZRI8 547 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 ITFG1Q8TB96 612 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 RORBQ92753 470 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 RNF34Q969K3 372 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 TEKT5Q96M29 485 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms