RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 ZPBPQ9BS86 351 aa14.8□□□□□ -0.04
PRKDC-203ENST00000432581 EFHD1Q9BUP0 239 aa14.8□□□□□ -0.04
PRKDC-203ENST00000432581 HSD3B7Q9H2F3 369 aa14.8□□□□□ -0.04
PRKDC-203ENST00000432581 STN1Q9H668 368 aaKnown RBP14.8□□□□□ -0.04
PRKDC-203ENST00000432581 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.8□□□□□ -0.04
PRKDC-203ENST00000432581 OCIAD1Q9NX40 245 aa14.8□□□□□ -0.04
PRKDC-203ENST00000432581 AIPL1Q9NZN9 384 aa14.8□□□□□ -0.04
PRKDC-203ENST00000432581 TMEM9Q9P0T7 183 aa14.8□□□□□ -0.04
PRKDC-203ENST00000432581 CD84Q9UIB8 345 aa14.8□□□□□ -0.04
PRKDC-203ENST00000432581 TMEM98Q9Y2Y6 226 aa14.8□□□□□ -0.04
PRKDC-203ENST00000432581 PLEKHM1Q9Y4G2 1056 aa14.8□□□□□ -0.04
PRKDC-203ENST00000432581 FZD6O60353 706 aa14.79□□□□□ -0.04
PRKDC-203ENST00000432581 PRKCIP41743 596 aa14.79□□□□□ -0.04
PRKDC-203ENST00000432581 PPM1FP49593 454 aaPredicted RBP14.79□□□□□ -0.04
PRKDC-203ENST00000432581 PTSQ03393 145 aa14.79□□□□□ -0.04
PRKDC-203ENST00000432581 PTPRRQ15256 657 aa14.79□□□□□ -0.04
PRKDC-203ENST00000432581 WDR74Q6RFH5 385 aaPredicted RBP14.79□□□□□ -0.04
PRKDC-203ENST00000432581 MARK2Q7KZI7 788 aaKnown RBP14.79□□□□□ -0.04
PRKDC-203ENST00000432581 RAVER1Q8IY67 606 aaKnown RBP14.79□□□□□ -0.04
PRKDC-203ENST00000432581 NLGN4XQ8N0W4 816 aa14.79□□□□□ -0.04
PRKDC-203ENST00000432581 TEX26Q8N6G2 289 aa14.79□□□□□ -0.04
PRKDC-203ENST00000432581 BMPERQ8N8U9 685 aa14.79□□□□□ -0.04
PRKDC-203ENST00000432581 NLGN4YQ8NFZ3 816 aaPredicted RBP14.79□□□□□ -0.04
PRKDC-203ENST00000432581 EXD1Q8NHP7 514 aa14.79□□□□□ -0.04
PRKDC-203ENST00000432581 SLC37A2Q8TED4 501 aa14.79□□□□□ -0.04
PRKDC-203ENST00000432581 TEKT4Q8WW24 435 aa14.79□□□□□ -0.04
PRKDC-203ENST00000432581 SCAMP4Q969E2 229 aa14.79□□□□□ -0.04
PRKDC-203ENST00000432581 KIAA1143Q96AT1 154 aaPredicted RBP14.79□□□□□ -0.04
PRKDC-203ENST00000432581 SLC45A3Q96JT2 553 aa14.79□□□□□ -0.04
PRKDC-203ENST00000432581 POLR1EQ9GZS1 481 aaKnown RBP14.79□□□□□ -0.04
PRKDC-203ENST00000432581 NT5MQ9NPB1 228 aa14.79□□□□□ -0.04
PRKDC-203ENST00000432581 MYO1AQ9UBC5 1043 aa14.79□□□□□ -0.04
PRKDC-203ENST00000432581 PILRAQ9UKJ1 303 aa14.79□□□□□ -0.04
PRKDC-203ENST00000432581 SDK2Q58EX2 2172 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 A0A0J9YYE9 177 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 DDX3XO00571 662 aaKnown RBP eCLIP14.78□□□□□ -0.04
PRKDC-203ENST00000432581 MAP3K6O95382 1288 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 TRBC1P01850 177 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 PDHA1P08559 390 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 RARAP10276 462 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 CES1P23141 567 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 MAP4P27816 1152 aaKnown RBP14.78□□□□□ -0.04
PRKDC-203ENST00000432581 STC1P52823 247 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 EPHB1P54762 984 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 MC2RQ01718 297 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 HHEXQ03014 270 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 ITKQ08881 620 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 KLHL30Q0D2K2 578 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 PIGHQ14442 188 aaPredicted RBP14.78□□□□□ -0.04
PRKDC-203ENST00000432581 COLEC12Q5KU26 742 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.78□□□□□ -0.04
PRKDC-203ENST00000432581 ANKS6Q68DC2 871 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 CEACAM20Q6UY09 585 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 RFLNAQ6ZTI6 216 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 TRIM74Q86UV6 250 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 PTRH1Q86Y79 214 aaKnown RBP14.78□□□□□ -0.04
PRKDC-203ENST00000432581 SH3KBP1Q96B97 665 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 RTP4Q96DX8 246 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 COX14Q96I36 57 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 GPN2Q9H9Y4 310 aaPredicted RBP14.78□□□□□ -0.04
PRKDC-203ENST00000432581 SARS2Q9NP81 518 aaKnown RBP14.78□□□□□ -0.04
PRKDC-203ENST00000432581 RTN4Q9NQC3 1192 aaKnown RBP14.78□□□□□ -0.04
PRKDC-203ENST00000432581 HAUS2Q9NVX0 235 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 VPS18Q9P253 973 aa14.78□□□□□ -0.04
PRKDC-203ENST00000432581 RCOR3Q9P2K3 495 aaPredicted RBP14.78□□□□□ -0.04
PRKDC-203ENST00000432581 ASMTLO95671 621 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 SLC2A4P14672 509 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 TCF4P15884 667 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 CA4P22748 312 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 EPHA4P54764 986 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 SNAP47Q5SQN1 464 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 ALG1LQ6GMV1 187 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 ARHGAP22Q7Z5H3 698 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 ZNF761Q86XN6 746 aaPredicted RBP14.77□□□□□ -0.05
PRKDC-203ENST00000432581 AOPEPQ8N6M6 819 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 HERPUD2Q9BSE4 406 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 RIOK2Q9BVS4 552 aaKnown RBP14.77□□□□□ -0.05
PRKDC-203ENST00000432581 SPRY4Q9C004 299 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 ISCUQ9H1K1 167 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 TRIT1Q9H3H1 467 aaKnown RBP14.77□□□□□ -0.05
PRKDC-203ENST00000432581 EPB41L1Q9H4G0 881 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 PCDH18Q9HCL0 1135 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 FBXO8Q9NRD0 319 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 AMACRQ9UHK6 382 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 ZNHIT2Q9UHR6 403 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 ANAPC2Q9UJX6 822 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 LRRK2Q5S007 2527 aa14.77□□□□□ -0.05
PRKDC-203ENST00000432581 FLNCQ14315 2725 aa14.76□□□□□ -0.05
PRKDC-203ENST00000432581 TRBV23OR9-2A0A075B6M9 112 aa14.76□□□□□ -0.05
PRKDC-203ENST00000432581 A0A0U1RQS6 177 aa14.76□□□□□ -0.05
PRKDC-203ENST00000432581 INPP4BO15327 924 aa14.76□□□□□ -0.05
PRKDC-203ENST00000432581 DNAJC6O75061 913 aa14.76□□□□□ -0.05
PRKDC-203ENST00000432581 CASRP41180 1078 aa14.76□□□□□ -0.05
PRKDC-203ENST00000432581 NOP2P46087 812 aaKnown RBP14.76□□□□□ -0.05
PRKDC-203ENST00000432581 RPL26P61254 145 aaKnown RBP14.76□□□□□ -0.05
PRKDC-203ENST00000432581 MC1RQ01726 317 aa14.76□□□□□ -0.05
PRKDC-203ENST00000432581 SRSF1Q07955 248 aaKnown RBP eCLIP14.76□□□□□ -0.05
PRKDC-203ENST00000432581 ABHD18Q0P651 414 aa14.76□□□□□ -0.05
PRKDC-203ENST00000432581 KRT81Q14533 505 aa14.76□□□□□ -0.05
PRKDC-203ENST00000432581 FILIP1LQ4L180 1135 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms